Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=42)
GHQIVHVRGDSETDLEALFNAVNPKQTVPRLRKLPDSFFKPP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8a8q-a1-m1-cD 42 42 1.0000 1.0000 1.0000 5.36e-26 8a8q-a1-m1-cC_8a8q-a1-m1-cD
2 8a8q-a1-m1-cC 41 42 0.9762 1.0000 0.9762 1.92e-23 8a8q-a1-m1-cC_8a8q-a1-m1-cD
3 4j40-a1-m1-cB 251 27 0.2619 0.0438 0.4074 1.5 4j40-a1-m1-cA_4j40-a1-m1-cB
4 4j40-a1-m1-cA 251 27 0.2619 0.0438 0.4074 1.5 4j40-a1-m1-cA_4j40-a1-m1-cB
5 4tr2-a3-m1-cA 471 28 0.3095 0.0276 0.4643 3.0 4tr2-a3-m1-cA_4tr2-a3-m1-cB
6 4tr2-a3-m1-cB 474 28 0.3095 0.0274 0.4643 3.2 4tr2-a3-m1-cA_4tr2-a3-m1-cB
7 7kfu-a1-m1-cE 909 23 0.2381 0.0110 0.4348 7.2 7kfu-a1-m1-cF_7kfu-a1-m1-cE
8 7kfu-a1-m1-cC 909 23 0.2381 0.0110 0.4348 7.2 7kfu-a1-m1-cF_7kfu-a1-m1-cC
9 2v6k-a1-m1-cB 214 20 0.2381 0.0467 0.5000 9.1 2v6k-a1-m1-cA_2v6k-a1-m1-cB
10 2v6k-a1-m1-cA 214 20 0.2381 0.0467 0.5000 9.1 2v6k-a1-m1-cA_2v6k-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600