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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=41)
GHQIVHVRGDSETDLEALFNAVNPQTVPRLRKLPDSFFKPP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8a8q-a1-m1-cC 41 41 1.0000 1.0000 1.0000 3.22e-25 8a8q-a1-m1-cC_8a8q-a1-m1-cD
2 8a8q-a1-m1-cD 42 42 1.0000 0.9762 0.9762 1.88e-23 8a8q-a1-m1-cC_8a8q-a1-m1-cD
3 4j40-a1-m1-cB 251 22 0.2195 0.0359 0.4091 1.5 4j40-a1-m1-cA_4j40-a1-m1-cB
4 4j40-a1-m1-cA 251 22 0.2195 0.0359 0.4091 1.5 4j40-a1-m1-cA_4j40-a1-m1-cB
5 2aps-a1-m1-cB 155 25 0.3171 0.0839 0.5200 6.5 2aps-a1-m1-cA_2aps-a1-m1-cB
6 2aps-a1-m1-cA 155 25 0.3171 0.0839 0.5200 6.5 2aps-a1-m1-cA_2aps-a1-m1-cB
7 2di3-a1-m1-cB 230 23 0.2927 0.0522 0.5217 7.8 2di3-a1-m1-cB_2di3-a1-m1-cA
8 2di3-a1-m1-cA 231 23 0.2927 0.0519 0.5217 7.8 2di3-a1-m1-cB_2di3-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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