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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=86)
GHSLEEWIKADSLEKADEYHKRYNYAVTNPVRRKILRLDKGRSEEEIQTLSLSKKQLDYH
LKVLEAGFCIERVGERWVVTDAGKIV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1y0u-a1-m1-cA 86 86 1.0000 1.0000 1.0000 2.23e-59 1y0u-a1-m1-cB_1y0u-a1-m1-cA
2 1y0u-a1-m1-cB 85 85 0.9884 1.0000 1.0000 8.16e-59 1y0u-a1-m1-cB_1y0u-a1-m1-cA
3 1dek-a1-m1-cA 240 81 0.2674 0.0958 0.2840 1.8 1dek-a1-m1-cB_1dek-a1-m1-cA
4 6j0e-a1-m1-cB 125 70 0.2674 0.1840 0.3286 2.4 6j0e-a1-m1-cA_6j0e-a1-m1-cB
5 7yxx-a1-m1-cC 1741 35 0.1395 0.0069 0.3429 2.4 7yxx-a1-m1-cC_7yxx-a1-m1-cA, 7yxx-a1-m1-cC_7yxx-a1-m1-cB
6 6j0e-a1-m1-cA 124 58 0.2558 0.1774 0.3793 2.4 6j0e-a1-m1-cA_6j0e-a1-m1-cB
7 7yxx-a1-m1-cB 1754 35 0.1395 0.0068 0.3429 2.4 7yxx-a1-m1-cC_7yxx-a1-m1-cB
8 7yxx-a1-m1-cA 1754 35 0.1395 0.0068 0.3429 2.4 7yxx-a1-m1-cC_7yxx-a1-m1-cA
9 3fvc-a1-m3-cA 559 35 0.1628 0.0250 0.4000 2.6 3fvc-a1-m2-cA_3fvc-a1-m3-cA
10 3fvc-a1-m2-cA 559 35 0.1628 0.0250 0.4000 2.6 3fvc-a1-m2-cA_3fvc-a1-m3-cA
11 5wch-a1-m1-cD 330 35 0.1395 0.0364 0.3429 3.3 5wch-a1-m1-cD_5wch-a1-m1-cA, 5wch-a1-m1-cD_5wch-a1-m1-cC
12 6d25-a2-m1-cF 493 34 0.1279 0.0223 0.3235 3.6 6d25-a2-m1-cD_6d25-a2-m1-cF
13 6d25-a2-m1-cD 493 34 0.1279 0.0223 0.3235 3.6 6d25-a2-m1-cD_6d25-a2-m1-cF
14 3fkj-a1-m1-cB 319 40 0.1395 0.0376 0.3000 3.6 3fkj-a1-m1-cB_3fkj-a1-m1-cA
15 3fkj-a1-m1-cA 330 40 0.1395 0.0364 0.3000 3.7 3fkj-a1-m1-cB_3fkj-a1-m1-cA
16 5wch-a1-m1-cA 350 57 0.1860 0.0457 0.2807 4.4 5wch-a1-m1-cD_5wch-a1-m1-cA
17 5wch-a1-m1-cC 342 57 0.1860 0.0468 0.2807 5.1 5wch-a1-m1-cD_5wch-a1-m1-cC
18 6ph4-a1-m1-cB 460 35 0.1628 0.0304 0.4000 6.4 6ph4-a1-m1-cA_6ph4-a1-m1-cB
19 6pps-a2-m1-cD 259 35 0.1628 0.0541 0.4000 7.1 6pps-a2-m1-cC_6pps-a2-m1-cD
20 6ph4-a1-m1-cA 313 35 0.1628 0.0447 0.4000 8.3 6ph4-a1-m1-cA_6ph4-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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