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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=77)
GHYRRYKNILEMYLASHKGRRLLNIVYSWGAAVVILGALFKLLHLPMGNEMLFVGMITEF
LVFFISGFEKPAMEYHW

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7sat-a1-m1-cE 80 77 1.0000 0.9625 1.0000 2.89e-52 7sat-a1-m1-cF_7sat-a1-m1-cE
2 7sat-a1-m1-cF 77 77 1.0000 1.0000 1.0000 3.08e-52 7sat-a1-m1-cF_7sat-a1-m1-cE
3 7sau-a1-m1-cE 72 61 0.3896 0.4167 0.4918 3.22e-15 7sau-a1-m1-cF_7sau-a1-m1-cE
4 7sau-a1-m1-cF 71 61 0.3896 0.4225 0.4918 3.43e-15 7sau-a1-m1-cF_7sau-a1-m1-cE
5 7sax-a1-m1-cC 60 55 0.3377 0.4333 0.4727 5.00e-11 7sax-a1-m1-cG_7sax-a1-m1-cC
6 6ys8-a1-m1-cG 60 54 0.3247 0.4167 0.4630 8.19e-10 6ys8-a1-m1-cF_6ys8-a1-m1-cG
7 6ys8-a1-m1-cF 60 54 0.3247 0.4167 0.4630 8.19e-10 6ys8-a1-m1-cF_6ys8-a1-m1-cG
8 7sax-a1-m1-cG 50 48 0.3117 0.4800 0.5000 4.29e-09 7sax-a1-m1-cG_7sax-a1-m1-cC
9 7saz-a1-m1-cF 57 57 0.2987 0.4035 0.4035 1.76e-06 7saz-a1-m1-cE_7saz-a1-m1-cF
10 7saz-a1-m1-cE 56 56 0.2857 0.3929 0.3929 1.41e-05 7saz-a1-m1-cE_7saz-a1-m1-cF
11 4zhj-a1-m1-cB 1233 51 0.2078 0.0130 0.3137 0.16 4zhj-a1-m1-cB_4zhj-a1-m1-cA
12 4zhj-a1-m1-cA 1258 51 0.2078 0.0127 0.3137 0.16 4zhj-a1-m1-cB_4zhj-a1-m1-cA
13 7t8o-a1-m1-cB 221 35 0.1558 0.0543 0.3429 7.2 7t8o-a1-m1-cA_7t8o-a1-m1-cB
14 7t8o-a1-m1-cA 219 35 0.1558 0.0548 0.3429 8.0 7t8o-a1-m1-cA_7t8o-a1-m1-cB
15 4a27-a1-m1-cA 314 47 0.2078 0.0510 0.3404 9.4 4a27-a1-m1-cB_4a27-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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