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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
GHYRRYKNILEMYLASHKGRRLLNIVYSWGAAVVILGALFKLLHLPMGNEMLFVGMITEF
LVFFISGFEKPAMEYHWEEV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7sat-a1-m1-cE 80 80 1.0000 1.0000 1.0000 2.47e-54 7sat-a1-m1-cF_7sat-a1-m1-cE
2 7sat-a1-m1-cF 77 77 0.9625 1.0000 1.0000 3.00e-52 7sat-a1-m1-cF_7sat-a1-m1-cE
3 7sau-a1-m1-cE 72 64 0.3875 0.4306 0.4844 2.57e-15 7sau-a1-m1-cF_7sau-a1-m1-cE
4 7sau-a1-m1-cF 71 64 0.3875 0.4366 0.4844 2.89e-15 7sau-a1-m1-cF_7sau-a1-m1-cE
5 7sax-a1-m1-cC 60 58 0.3375 0.4500 0.4655 1.79e-11 7sax-a1-m1-cG_7sax-a1-m1-cC
6 6ys8-a1-m1-cG 60 54 0.3125 0.4167 0.4630 9.94e-10 6ys8-a1-m1-cF_6ys8-a1-m1-cG
7 6ys8-a1-m1-cF 60 54 0.3125 0.4167 0.4630 9.94e-10 6ys8-a1-m1-cF_6ys8-a1-m1-cG
8 7sax-a1-m1-cG 50 48 0.3000 0.4800 0.5000 4.51e-09 7sax-a1-m1-cG_7sax-a1-m1-cC
9 7saz-a1-m1-cF 57 57 0.2875 0.4035 0.4035 2.19e-06 7saz-a1-m1-cE_7saz-a1-m1-cF
10 7saz-a1-m1-cE 56 56 0.2750 0.3929 0.3929 1.65e-05 7saz-a1-m1-cE_7saz-a1-m1-cF
11 4zhj-a1-m1-cB 1233 53 0.2125 0.0138 0.3208 0.020 4zhj-a1-m1-cB_4zhj-a1-m1-cA
12 4zhj-a1-m1-cA 1258 53 0.2000 0.0127 0.3019 0.082 4zhj-a1-m1-cB_4zhj-a1-m1-cA
13 7t8o-a1-m1-cB 221 35 0.1500 0.0543 0.3429 8.6 7t8o-a1-m1-cA_7t8o-a1-m1-cB
14 7t8o-a1-m1-cA 219 35 0.1500 0.0548 0.3429 9.1 7t8o-a1-m1-cA_7t8o-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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