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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=89)
GIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGA
DACERVGDGLVAAHIIARVHSEVENILPK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2ewh-a1-m6-cA 92 89 1.0000 0.9674 1.0000 1.20e-57 2ewh-a1-m2-cA_2ewh-a1-m6-cA
2 2ewh-a1-m2-cA 92 89 1.0000 0.9674 1.0000 1.20e-57 2ewh-a1-m2-cA_2ewh-a1-m6-cA
3 7ckc-a1-m1-cCz 89 89 1.0000 1.0000 1.0000 1.21e-57 7ckc-a1-m1-cBi_7ckc-a1-m1-cCz
4 7ckc-a1-m1-cBi 89 89 1.0000 1.0000 1.0000 1.21e-57 7ckc-a1-m1-cBi_7ckc-a1-m1-cCz
5 4axj-a1-m2-cC 86 86 0.6517 0.6744 0.6744 5.64e-27 4axj-a1-m2-cC_4axj-a1-m1-cA
6 4axj-a1-m1-cA 87 86 0.6517 0.6667 0.6744 6.40e-27 4axj-a1-m2-cC_4axj-a1-m1-cA
7 7mmx-a2-m1-cD 86 85 0.6292 0.6512 0.6588 4.92e-25 7mmx-a2-m3-cF_7mmx-a2-m1-cD
8 7mmx-a2-m3-cF 85 85 0.6292 0.6588 0.6588 6.43e-25 7mmx-a2-m3-cF_7mmx-a2-m1-cD
9 3ssq-a1-m2-cC 100 88 0.5393 0.4800 0.5455 1.68e-24 3ssq-a1-m1-cC_3ssq-a1-m2-cC
10 3ssq-a1-m1-cC 100 88 0.5393 0.4800 0.5455 1.68e-24 3ssq-a1-m1-cC_3ssq-a1-m2-cC
11 3dnc-a1-m6-cA 90 88 0.5281 0.5222 0.5341 9.45e-24 3dnc-a1-m2-cA_3dnc-a1-m6-cA
12 3dnc-a1-m2-cA 90 88 0.5281 0.5222 0.5341 9.45e-24 3dnc-a1-m2-cA_3dnc-a1-m6-cA
13 6owg-a1-m1-cDA 100 88 0.5169 0.4600 0.5227 1.83e-22 6owg-a1-m1-cC8_6owg-a1-m1-cDA
14 6owg-a1-m1-cC8 100 88 0.5169 0.4600 0.5227 1.83e-22 6owg-a1-m1-cC8_6owg-a1-m1-cDA
15 6owf-a1-m1-cW 100 88 0.5169 0.4600 0.5227 1.83e-22 6owf-a1-m1-cA6_6owf-a1-m1-cW
16 6owf-a1-m1-cA6 100 88 0.5169 0.4600 0.5227 1.83e-22 6owf-a1-m1-cA6_6owf-a1-m1-cW
17 5d6v-a1-m6-cA 90 87 0.5730 0.5667 0.5862 7.50e-22 5d6v-a1-m2-cA_5d6v-a1-m6-cA
18 5d6v-a1-m2-cA 90 87 0.5730 0.5667 0.5862 7.50e-22 5d6v-a1-m2-cA_5d6v-a1-m6-cA
19 3mpy-a1-m6-cA 96 86 0.5393 0.5000 0.5581 2.28e-21 3mpy-a1-m2-cA_3mpy-a1-m6-cA
20 3mpy-a1-m2-cA 96 86 0.5393 0.5000 0.5581 2.28e-21 3mpy-a1-m2-cA_3mpy-a1-m6-cA
21 7mgp-a1-m6-cA 93 87 0.4494 0.4301 0.4598 1.19e-15 7mgp-a1-m2-cA_7mgp-a1-m6-cA
22 7mgp-a1-m2-cA 93 87 0.4494 0.4301 0.4598 1.19e-15 7mgp-a1-m2-cA_7mgp-a1-m6-cA
23 4ox6-a1-m3-cB 93 87 0.3483 0.3333 0.3563 7.22e-11 4ox6-a1-m3-cB_4ox6-a1-m3-cA
24 4ox6-a1-m3-cA 103 87 0.3483 0.3010 0.3563 8.28e-11 4ox6-a1-m3-cB_4ox6-a1-m3-cA
25 2a10-a1-m1-cE 102 87 0.3820 0.3333 0.3908 1.50e-08 2a10-a1-m1-cD_2a10-a1-m1-cE
26 2a10-a1-m1-cD 102 87 0.3820 0.3333 0.3908 1.50e-08 2a10-a1-m1-cD_2a10-a1-m1-cE
27 3nwg-a2-m3-cA 174 81 0.3371 0.1724 0.3704 1.72e-06 3nwg-a2-m2-cA_3nwg-a2-m3-cA
28 3nwg-a2-m3-cA 174 83 0.3483 0.1782 0.3735 3.41e-04 3nwg-a2-m2-cA_3nwg-a2-m3-cA
29 3nwg-a2-m2-cA 174 81 0.3371 0.1724 0.3704 1.72e-06 3nwg-a2-m2-cA_3nwg-a2-m3-cA
30 3nwg-a2-m2-cA 174 83 0.3483 0.1782 0.3735 3.41e-04 3nwg-a2-m2-cA_3nwg-a2-m3-cA
31 3nwg-a1-m6-cA 174 81 0.3371 0.1724 0.3704 1.72e-06 3nwg-a1-m1-cA_3nwg-a1-m6-cA, 3nwg-a1-m3-cA_3nwg-a1-m6-cA
32 3nwg-a1-m6-cA 174 83 0.3483 0.1782 0.3735 3.41e-04 3nwg-a1-m1-cA_3nwg-a1-m6-cA, 3nwg-a1-m3-cA_3nwg-a1-m6-cA
33 3nwg-a1-m3-cA 174 81 0.3371 0.1724 0.3704 1.72e-06 3nwg-a1-m3-cA_3nwg-a1-m6-cA
34 3nwg-a1-m3-cA 174 83 0.3483 0.1782 0.3735 3.41e-04 3nwg-a1-m3-cA_3nwg-a1-m6-cA
35 3nwg-a1-m1-cA 174 81 0.3371 0.1724 0.3704 1.72e-06 3nwg-a1-m1-cA_3nwg-a1-m6-cA
36 3nwg-a1-m1-cA 174 83 0.3483 0.1782 0.3735 3.41e-04 3nwg-a1-m1-cA_3nwg-a1-m6-cA
37 3pac-a1-m3-cA 183 81 0.2809 0.1366 0.3086 3.82e-06 3pac-a1-m2-cA_3pac-a1-m3-cA
38 3pac-a1-m3-cA 183 83 0.3146 0.1530 0.3373 0.073 3pac-a1-m2-cA_3pac-a1-m3-cA
39 3pac-a1-m2-cA 183 81 0.2809 0.1366 0.3086 3.82e-06 3pac-a1-m2-cA_3pac-a1-m3-cA
40 3pac-a1-m2-cA 183 83 0.3146 0.1530 0.3373 0.073 3pac-a1-m2-cA_3pac-a1-m3-cA
41 4j8q-a1-m2-cA 191 56 0.1685 0.0785 0.2679 0.078 4j8q-a1-m1-cA_4j8q-a1-m2-cA
42 4j8q-a1-m1-cA 191 56 0.1685 0.0785 0.2679 0.078 4j8q-a1-m1-cA_4j8q-a1-m2-cA
43 3ajv-a1-m1-cB 180 38 0.1573 0.0778 0.3684 5.1 3ajv-a1-m1-cD_3ajv-a1-m1-cB
44 3ajv-a1-m1-cD 178 38 0.1573 0.0787 0.3684 5.2 3ajv-a1-m1-cD_3ajv-a1-m1-cB
45 7pty-a1-m1-cA 850 76 0.2247 0.0235 0.2632 5.6 7pty-a1-m1-cA_7pty-a1-m1-cB
46 7pty-a1-m1-cB 865 76 0.2247 0.0231 0.2632 5.6 7pty-a1-m1-cA_7pty-a1-m1-cB
47 1a3a-a2-m1-cB 141 21 0.1236 0.0780 0.5238 7.0 1a3a-a2-m1-cB_1a3a-a2-m1-cD
48 1a3a-a2-m1-cD 144 21 0.1236 0.0764 0.5238 7.7 1a3a-a2-m1-cB_1a3a-a2-m1-cD
49 5vkq-a1-m1-cD 1499 42 0.1798 0.0107 0.3810 9.1 5vkq-a1-m1-cC_5vkq-a1-m1-cD
50 5vkq-a1-m1-cC 1499 42 0.1798 0.0107 0.3810 9.1 5vkq-a1-m1-cC_5vkq-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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