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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=70)
GICPRFAHVIENLLLGTPSSYETSLKEFEPDDTMKDAGMQMKKVLDSLPQTTRENIMKLT
EKIVKSPLCM

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1utg-a1-m2-cA 70 70 1.0000 1.0000 1.0000 7.37e-48 1utg-a1-m1-cA_1utg-a1-m2-cA
2 1utg-a1-m1-cA 70 70 1.0000 1.0000 1.0000 7.37e-48 1utg-a1-m1-cA_1utg-a1-m2-cA
3 1ccd-a1-m2-cA 77 68 0.5571 0.5065 0.5735 2.74e-24 1ccd-a1-m1-cA_1ccd-a1-m2-cA
4 1ccd-a1-m1-cA 77 68 0.5571 0.5065 0.5735 2.74e-24 1ccd-a1-m1-cA_1ccd-a1-m2-cA
5 2ejn-a1-m1-cA 146 70 0.2714 0.1301 0.2714 2.13e-04 2ejn-a1-m1-cB_2ejn-a1-m1-cA
6 1zkr-a1-m1-cA 146 70 0.2714 0.1301 0.2714 2.13e-04 1zkr-a1-m1-cB_1zkr-a1-m1-cA
7 2ejn-a1-m1-cB 145 70 0.2714 0.1310 0.2714 2.17e-04 2ejn-a1-m1-cB_2ejn-a1-m1-cA
8 1zkr-a1-m1-cB 145 70 0.2714 0.1310 0.2714 2.17e-04 1zkr-a1-m1-cB_1zkr-a1-m1-cA
9 5ue0-a2-m4-cA 276 32 0.2143 0.0543 0.4688 0.81 5ue0-a2-m1-cA_5ue0-a2-m4-cA, 5ue0-a2-m2-cA_5ue0-a2-m4-cA, 5ue0-a2-m3-cA_5ue0-a2-m4-cA
10 5ue0-a2-m3-cA 276 32 0.2143 0.0543 0.4688 0.81 5ue0-a2-m3-cA_5ue0-a2-m4-cA
11 5ue0-a2-m2-cA 276 32 0.2143 0.0543 0.4688 0.81 5ue0-a2-m2-cA_5ue0-a2-m4-cA
12 5ue0-a2-m1-cA 276 32 0.2143 0.0543 0.4688 0.81 5ue0-a2-m1-cA_5ue0-a2-m4-cA
13 7jrp-a1-m1-cN 455 30 0.1429 0.0220 0.3333 2.0 7jrp-a1-m1-cN_7jrp-a1-m1-cB
14 7jrp-a1-m1-cB 457 30 0.1429 0.0219 0.3333 2.0 7jrp-a1-m1-cN_7jrp-a1-m1-cB
15 2ftc-a1-m1-cF 137 30 0.1571 0.0803 0.3667 3.3 2ftc-a1-m1-cE_2ftc-a1-m1-cF
16 2ftc-a1-m1-cE 137 30 0.1571 0.0803 0.3667 3.3 2ftc-a1-m1-cE_2ftc-a1-m1-cF
17 1y56-a1-m4-cA 484 41 0.1857 0.0269 0.3171 5.1 1y56-a1-m1-cA_1y56-a1-m4-cA, 1y56-a1-m2-cA_1y56-a1-m4-cA
18 1y56-a1-m2-cA 484 41 0.1857 0.0269 0.3171 5.1 1y56-a1-m2-cA_1y56-a1-m4-cA
19 1y56-a1-m1-cA 484 41 0.1857 0.0269 0.3171 5.1 1y56-a1-m1-cA_1y56-a1-m4-cA
20 5gkd-a1-m1-cD 726 23 0.1286 0.0124 0.3913 5.1 5gkd-a1-m1-cA_5gkd-a1-m1-cD
21 5gkd-a1-m1-cA 726 23 0.1286 0.0124 0.3913 5.1 5gkd-a1-m1-cA_5gkd-a1-m1-cD
22 5ie4-a2-m2-cC 151 63 0.2714 0.1258 0.3016 5.7 5ie4-a2-m1-cC_5ie4-a2-m2-cC
23 5ie4-a2-m1-cC 151 63 0.2714 0.1258 0.3016 5.7 5ie4-a2-m1-cC_5ie4-a2-m2-cC
24 6eun-a1-m1-cC 145 48 0.2000 0.0966 0.2917 7.8 6eun-a1-m1-cB_6eun-a1-m1-cC
25 6eun-a1-m1-cB 145 48 0.2000 0.0966 0.2917 7.8 6eun-a1-m1-cB_6eun-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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