Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=69)
GIDYILLGEIATENQFEVTYVDIEETFSGQFQCLVQLSTLPVGVCHGSGPTAADAQRHAA
QNALEYLIM

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4x8w-a1-m1-cA 69 69 1.0000 1.0000 1.0000 7.05e-47 4x8w-a1-m1-cA_4x8w-a1-m1-cE
2 4x8w-a1-m1-cD 70 69 1.0000 0.9857 1.0000 7.25e-47 4x8w-a1-m1-cD_4x8w-a1-m1-cE
3 4x8w-a1-m1-cE 72 69 1.0000 0.9583 1.0000 8.85e-47 4x8w-a1-m1-cA_4x8w-a1-m1-cE, 4x8w-a1-m1-cB_4x8w-a1-m1-cE, 4x8w-a1-m1-cD_4x8w-a1-m1-cE
4 4x8w-a1-m1-cB 69 68 0.9855 0.9855 1.0000 4.42e-46 4x8w-a1-m1-cB_4x8w-a1-m1-cE
5 4dkk-a1-m2-cA 104 52 0.2319 0.1538 0.3077 0.72 4dkk-a1-m1-cA_4dkk-a1-m2-cA
6 4dkk-a1-m1-cA 104 52 0.2319 0.1538 0.3077 0.72 4dkk-a1-m1-cA_4dkk-a1-m2-cA
7 6zm9-a1-m3-cA 129 31 0.1594 0.0853 0.3548 5.1 6zm9-a1-m2-cA_6zm9-a1-m3-cA
8 6zm9-a1-m2-cA 129 31 0.1594 0.0853 0.3548 5.1 6zm9-a1-m2-cA_6zm9-a1-m3-cA
9 6nim-a1-m1-cB 113 35 0.2319 0.1416 0.4571 5.2 6nim-a1-m1-cA_6nim-a1-m1-cB
10 6nim-a1-m1-cA 113 35 0.2319 0.1416 0.4571 5.2 6nim-a1-m1-cA_6nim-a1-m1-cB
11 3k5x-a2-m2-cA 391 59 0.2319 0.0409 0.2712 7.3 3k5x-a2-m1-cA_3k5x-a2-m2-cA
12 3k5x-a2-m1-cA 391 59 0.2319 0.0409 0.2712 7.3 3k5x-a2-m1-cA_3k5x-a2-m2-cA
13 3i82-a1-m3-cA 216 46 0.2174 0.0694 0.3261 9.9 3i82-a1-m2-cA_3i82-a1-m3-cA
14 3i82-a1-m2-cA 216 46 0.2174 0.0694 0.3261 9.9 3i82-a1-m2-cA_3i82-a1-m3-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600