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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=92)
GIEKEVNVYKSEDSLGLTITDNGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVG
WRHYDVAKKLKELKKEELFTMKLIEPKKSSEA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3gge-a2-m2-cC 95 92 1.0000 0.9684 1.0000 3.50e-62 3gge-a2-m1-cB_3gge-a2-m2-cC, 3gge-a2-m2-cA_3gge-a2-m2-cC, 3gge-a2-m2-cB_3gge-a2-m2-cC
2 3gge-a2-m2-cA 95 92 1.0000 0.9684 1.0000 3.50e-62 3gge-a2-m2-cA_3gge-a2-m2-cC, 3gge-a2-m2-cB_3gge-a2-m2-cA
3 3gge-a2-m2-cB 92 92 1.0000 1.0000 1.0000 4.78e-62 3gge-a2-m2-cB_3gge-a2-m2-cA, 3gge-a2-m2-cB_3gge-a2-m2-cC
4 3gge-a2-m1-cB 92 92 1.0000 1.0000 1.0000 4.78e-62 3gge-a2-m1-cB_3gge-a2-m2-cC
5 5v6t-a2-m5-cB 161 88 0.6087 0.3478 0.6364 1.84e-36 5v6t-a2-m2-cB_5v6t-a2-m5-cB
6 5v6t-a2-m2-cB 161 88 0.6087 0.3478 0.6364 1.84e-36 5v6t-a2-m2-cB_5v6t-a2-m5-cB
7 1kwa-a5-m1-cA 88 64 0.2065 0.2159 0.2969 5.72e-06 1kwa-a5-m2-cB_1kwa-a5-m1-cA
8 1kwa-a4-m1-cA 88 64 0.2065 0.2159 0.2969 5.72e-06 1kwa-a4-m1-cB_1kwa-a4-m1-cA
9 7qrt-a1-m1-cA 92 67 0.2391 0.2391 0.3284 3.47e-04 7qrt-a1-m1-cB_7qrt-a1-m1-cA
10 7qrt-a1-m1-cB 91 67 0.2391 0.2418 0.3284 3.83e-04 7qrt-a1-m1-cB_7qrt-a1-m1-cA
11 1kwa-a5-m2-cB 86 64 0.1957 0.2093 0.2812 0.001 1kwa-a5-m2-cB_1kwa-a5-m1-cA
12 1kwa-a4-m1-cB 86 64 0.1957 0.2093 0.2812 0.001 1kwa-a4-m1-cB_1kwa-a4-m1-cA
13 2vrf-a6-m1-cD 95 86 0.2826 0.2737 0.3023 0.018 2vrf-a6-m1-cC_2vrf-a6-m1-cD
14 2vrf-a6-m1-cC 95 86 0.2826 0.2737 0.3023 0.018 2vrf-a6-m1-cC_2vrf-a6-m1-cD
15 3o46-a1-m3-cA 83 82 0.2609 0.2892 0.2927 0.069 3o46-a1-m2-cA_3o46-a1-m3-cA
16 3o46-a1-m2-cA 83 82 0.2609 0.2892 0.2927 0.069 3o46-a1-m2-cA_3o46-a1-m3-cA
17 6nek-a1-m2-cA 86 69 0.2065 0.2209 0.2754 0.076 6nek-a1-m1-cA_6nek-a1-m2-cA
18 6nek-a1-m1-cA 86 69 0.2065 0.2209 0.2754 0.076 6nek-a1-m1-cA_6nek-a1-m2-cA
19 3lny-a1-m6-cA 94 73 0.2283 0.2234 0.2877 0.091 3lny-a1-m3-cA_3lny-a1-m6-cA, 3lny-a1-m5-cA_3lny-a1-m6-cA
20 3lny-a1-m5-cA 94 73 0.2283 0.2234 0.2877 0.091 3lny-a1-m5-cA_3lny-a1-m6-cA
21 3lny-a1-m3-cA 94 73 0.2283 0.2234 0.2877 0.091 3lny-a1-m3-cA_3lny-a1-m6-cA
22 6bjo-a1-m1-cA 86 34 0.1522 0.1628 0.4118 0.10 6bjo-a1-m1-cB_6bjo-a1-m1-cA
23 6bjo-a1-m1-cB 85 34 0.1522 0.1647 0.4118 0.10 6bjo-a1-m1-cB_6bjo-a1-m1-cA
24 3hpk-a3-m1-cA 112 34 0.1522 0.1250 0.4118 0.10 3hpk-a3-m1-cB_3hpk-a3-m1-cA
25 3hpk-a3-m1-cB 107 34 0.1522 0.1308 0.4118 0.11 3hpk-a3-m1-cB_3hpk-a3-m1-cA
26 7qsb-a1-m1-cA 84 69 0.1957 0.2143 0.2609 0.20 7qsb-a1-m1-cB_7qsb-a1-m1-cA
27 7mfw-a2-m2-cB 98 70 0.1848 0.1735 0.2429 0.38 7mfw-a2-m1-cA_7mfw-a2-m2-cB
28 7mfw-a1-m1-cB 98 70 0.1848 0.1735 0.2429 0.38 7mfw-a1-m1-cA_7mfw-a1-m1-cB
29 7mfw-a2-m1-cA 93 60 0.1630 0.1613 0.2500 0.48 7mfw-a2-m1-cA_7mfw-a2-m2-cB
30 7mfw-a1-m1-cA 93 60 0.1630 0.1613 0.2500 0.48 7mfw-a1-m1-cA_7mfw-a1-m1-cB
31 2ego-a1-m1-cA 88 57 0.1739 0.1818 0.2807 0.67 2ego-a1-m1-cA_2ego-a1-m1-cB
32 3axa-a2-m3-cB 97 76 0.2174 0.2062 0.2632 0.67 3axa-a2-m1-cB_3axa-a2-m3-cB
33 3axa-a2-m1-cB 97 76 0.2174 0.2062 0.2632 0.67 3axa-a2-m1-cB_3axa-a2-m3-cB
34 3qe1-a1-m2-cA 102 94 0.2717 0.2451 0.2660 0.71 3qe1-a1-m1-cA_3qe1-a1-m2-cA
35 3qe1-a1-m1-cA 102 94 0.2717 0.2451 0.2660 0.71 3qe1-a1-m1-cA_3qe1-a1-m2-cA
36 8ah6-a1-m1-cA 101 70 0.2283 0.2079 0.3000 0.78 8ah6-a1-m1-cA_8ah6-a1-m1-cB
37 8ah6-a1-m1-cB 102 70 0.2283 0.2059 0.3000 0.79 8ah6-a1-m1-cA_8ah6-a1-m1-cB
38 7qcr-a1-m1-cA 87 61 0.1739 0.1839 0.2623 0.80 7qcr-a1-m1-cB_7qcr-a1-m1-cA
39 2ego-a1-m1-cB 90 57 0.1739 0.1778 0.2807 0.81 2ego-a1-m1-cA_2ego-a1-m1-cB
40 5jxb-a1-m1-cC 119 70 0.2283 0.1765 0.3000 0.92 5jxb-a1-m1-cA_5jxb-a1-m1-cC
41 5jxb-a1-m1-cA 117 70 0.2283 0.1795 0.3000 0.93 5jxb-a1-m1-cA_5jxb-a1-m1-cC
42 7qcr-a1-m1-cB 86 61 0.1739 0.1860 0.2623 1.0 7qcr-a1-m1-cB_7qcr-a1-m1-cA
43 1tp5-a2-m2-cA 115 70 0.2283 0.1826 0.3000 1.2 1tp5-a2-m1-cA_1tp5-a2-m2-cA
44 1tp5-a2-m1-cA 115 70 0.2283 0.1826 0.3000 1.2 1tp5-a2-m1-cA_1tp5-a2-m2-cA
45 3bpd-a2-m1-cN 89 48 0.2065 0.2135 0.3958 1.3 3bpd-a2-m1-cN_3bpd-a2-m1-cM
46 3qdo-a1-m2-cA 109 95 0.2717 0.2294 0.2632 1.3 3qdo-a1-m1-cA_3qdo-a1-m2-cA
47 3qdo-a1-m1-cA 109 95 0.2717 0.2294 0.2632 1.3 3qdo-a1-m1-cA_3qdo-a1-m2-cA
48 3bpd-a2-m1-cM 90 48 0.2065 0.2111 0.3958 1.4 3bpd-a2-m1-cN_3bpd-a2-m1-cM
49 4q2n-a3-m1-cE 97 80 0.2609 0.2474 0.3000 1.8 4q2n-a3-m1-cE_4q2n-a3-m1-cF
50 3khf-a3-m1-cA 96 24 0.1304 0.1250 0.5000 1.9 3khf-a3-m1-cA_3khf-a3-m1-cB
51 3khf-a3-m1-cB 97 24 0.1304 0.1237 0.5000 2.0 3khf-a3-m1-cA_3khf-a3-m1-cB
52 4q2n-a3-m1-cF 98 81 0.2609 0.2449 0.2963 2.6 4q2n-a3-m1-cE_4q2n-a3-m1-cF
53 4q2p-a1-m1-cB 87 34 0.1196 0.1264 0.3235 3.0 4q2p-a1-m1-cB_4q2p-a1-m1-cA
54 4q2p-a1-m1-cC 80 34 0.1196 0.1375 0.3235 3.0 4q2p-a1-m1-cC_4q2p-a1-m1-cA
55 4q2p-a1-m1-cA 98 34 0.1196 0.1122 0.3235 3.4 4q2p-a1-m1-cB_4q2p-a1-m1-cA, 4q2p-a1-m1-cC_4q2p-a1-m1-cA
56 3dj1-a3-m1-cA 115 57 0.1630 0.1304 0.2632 3.5 3dj1-a3-m6-cB_3dj1-a3-m1-cA
57 2xkx-a1-m1-cB 718 70 0.2283 0.0292 0.3000 3.5 2xkx-a1-m1-cB_2xkx-a1-m1-cA
58 2xkx-a1-m1-cA 721 70 0.2283 0.0291 0.3000 3.6 2xkx-a1-m1-cB_2xkx-a1-m1-cA
59 4dyw-a3-m1-cB 129 26 0.1087 0.0775 0.3846 4.0 4dyw-a3-m1-cA_4dyw-a3-m1-cB
60 4dyw-a3-m1-cA 129 26 0.1087 0.0775 0.3846 4.0 4dyw-a3-m1-cA_4dyw-a3-m1-cB
61 1y4u-a1-m1-cB 454 45 0.1957 0.0396 0.4000 5.1 1y4u-a1-m1-cB_1y4u-a1-m1-cA
62 7qsb-a1-m1-cB 80 57 0.1630 0.1875 0.2632 5.4 7qsb-a1-m1-cB_7qsb-a1-m1-cA
63 2fne-a4-m1-cB 100 76 0.1957 0.1800 0.2368 6.0 2fne-a4-m1-cB_2fne-a4-m2-cC
64 2fne-a4-m2-cC 104 76 0.1957 0.1731 0.2368 6.2 2fne-a4-m1-cB_2fne-a4-m2-cC
65 3ps4-a2-m1-cB 97 25 0.1087 0.1031 0.4000 7.3 3ps4-a2-m1-cC_3ps4-a2-m1-cB
66 3ps4-a2-m1-cC 96 25 0.1087 0.1042 0.4000 7.3 3ps4-a2-m1-cC_3ps4-a2-m1-cB
67 2ygy-a1-m1-cD 299 16 0.0978 0.0301 0.5625 7.4 2ygy-a1-m1-cA_2ygy-a1-m1-cD
68 2ygy-a1-m1-cA 299 16 0.0978 0.0301 0.5625 7.4 2ygy-a1-m1-cA_2ygy-a1-m1-cD
69 1fdy-a1-m1-cD 291 16 0.0978 0.0309 0.5625 7.4 1fdy-a1-m1-cB_1fdy-a1-m1-cD
70 1fdy-a1-m1-cB 291 16 0.0978 0.0309 0.5625 7.4 1fdy-a1-m1-cB_1fdy-a1-m1-cD
71 5vwi-a1-m1-cB 87 85 0.2283 0.2414 0.2471 7.8 5vwi-a1-m1-cB_5vwi-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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