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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=21)
GIGKFLHAKKFAKAFVAEIMN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5cgn-a2-m3-cF 21 21 1.0000 1.0000 1.0000 2.26e-08 5cgn-a2-m3-cE_5cgn-a2-m3-cF
2 5cgn-a2-m3-cE 21 21 1.0000 1.0000 1.0000 2.26e-08 5cgn-a2-m2-cG_5cgn-a2-m3-cE, 5cgn-a2-m3-cE_5cgn-a2-m3-cF
3 5cgn-a2-m2-cG 21 21 1.0000 1.0000 1.0000 2.26e-08 5cgn-a2-m2-cG_5cgn-a2-m3-cE
4 4mgp-a1-m2-cA 22 22 1.0000 0.9545 0.9545 1.38e-06 4mgp-a1-m1-cA_4mgp-a1-m2-cA
5 4mgp-a1-m1-cA 22 22 1.0000 0.9545 0.9545 1.38e-06 4mgp-a1-m1-cA_4mgp-a1-m2-cA
6 5cgo-a1-m1-cB 22 21 0.8571 0.8182 0.8571 3.74e-05 5cgo-a1-m1-cA_5cgo-a1-m1-cB
7 5cgo-a1-m1-cA 22 21 0.8571 0.8182 0.8571 3.74e-05 5cgo-a1-m1-cA_5cgo-a1-m1-cB
8 1dum-a1-m1-cB 23 22 0.8095 0.7391 0.7727 4.53e-05 1dum-a1-m1-cA_1dum-a1-m1-cB
9 1dum-a1-m1-cA 23 22 0.8095 0.7391 0.7727 4.53e-05 1dum-a1-m1-cA_1dum-a1-m1-cB
10 3cb3-a3-m2-cA 373 18 0.3810 0.0214 0.4444 4.1 3cb3-a3-m2-cD_3cb3-a3-m2-cA
11 3cb3-a3-m2-cD 358 18 0.3810 0.0223 0.4444 4.1 3cb3-a3-m2-cD_3cb3-a3-m2-cA
12 2og9-a1-m4-cB 354 18 0.3810 0.0226 0.4444 4.1 2og9-a1-m2-cA_2og9-a1-m4-cB, 2og9-a1-m2-cB_2og9-a1-m4-cB
13 2og9-a1-m2-cB 354 18 0.3810 0.0226 0.4444 4.1 2og9-a1-m2-cB_2og9-a1-m4-cB
14 2og9-a1-m2-cA 354 18 0.3810 0.0226 0.4444 4.1 2og9-a1-m2-cA_2og9-a1-m4-cB

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Reference:
Jacob Schwartz et al.

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