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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=23)
GIGKYLHSAKKFGKAWVGEIMNS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1dum-a1-m1-cB 23 23 1.0000 1.0000 1.0000 9.59e-11 1dum-a1-m1-cA_1dum-a1-m1-cB
2 1dum-a1-m1-cA 23 23 1.0000 1.0000 1.0000 9.59e-11 1dum-a1-m1-cA_1dum-a1-m1-cB
3 4mgp-a1-m2-cA 22 22 0.7391 0.7727 0.7727 4.04e-07 4mgp-a1-m1-cA_4mgp-a1-m2-cA
4 4mgp-a1-m1-cA 22 22 0.7391 0.7727 0.7727 4.04e-07 4mgp-a1-m1-cA_4mgp-a1-m2-cA
5 5cgo-a1-m1-cB 22 23 0.7826 0.8182 0.7826 7.23e-06 5cgo-a1-m1-cA_5cgo-a1-m1-cB
6 5cgo-a1-m1-cA 22 23 0.7826 0.8182 0.7826 7.23e-06 5cgo-a1-m1-cA_5cgo-a1-m1-cB
7 5cgn-a2-m3-cF 21 22 0.7391 0.8095 0.7727 4.96e-05 5cgn-a2-m3-cE_5cgn-a2-m3-cF
8 5cgn-a2-m3-cE 21 22 0.7391 0.8095 0.7727 4.96e-05 5cgn-a2-m2-cG_5cgn-a2-m3-cE, 5cgn-a2-m3-cE_5cgn-a2-m3-cF
9 5cgn-a2-m2-cG 21 22 0.7391 0.8095 0.7727 4.96e-05 5cgn-a2-m2-cG_5cgn-a2-m3-cE
10 1qfx-a1-m2-cB 443 18 0.3043 0.0158 0.3889 6.6 1qfx-a1-m1-cB_1qfx-a1-m2-cB, 1qfx-a1-m2-cA_1qfx-a1-m2-cB
11 1qfx-a1-m1-cB 443 18 0.3043 0.0158 0.3889 6.6 1qfx-a1-m1-cB_1qfx-a1-m2-cB
12 1qfx-a1-m2-cA 441 18 0.3043 0.0159 0.3889 8.3 1qfx-a1-m2-cA_1qfx-a1-m2-cB

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Reference:
Jacob Schwartz et al.

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