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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=92)
GIPRNSLEKFNVDLMKKAGKELGLSLSPNEIGCTIADLIQGQYPEIDSKLQRGDIITKFN
GDALEGLPFQVSYALFKGANGKVSMEVTRPKP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2qkv-a1-m6-cB 92 92 1.0000 1.0000 1.0000 8.14e-64 2qkv-a1-m2-cA_2qkv-a1-m6-cB, 2qkv-a1-m3-cA_2qkv-a1-m6-cB, 2qkv-a1-m5-cB_2qkv-a1-m6-cB
2 2qkv-a1-m5-cB 92 92 1.0000 1.0000 1.0000 8.14e-64 2qkv-a1-m5-cB_2qkv-a1-m6-cB
3 2qkv-a1-m3-cA 92 92 1.0000 1.0000 1.0000 8.14e-64 2qkv-a1-m3-cA_2qkv-a1-m6-cB
4 2qkv-a1-m2-cA 92 92 1.0000 1.0000 1.0000 8.14e-64 2qkv-a1-m2-cA_2qkv-a1-m6-cB
5 2qkt-a1-m4-cB 85 85 0.9130 0.9882 0.9882 2.22e-57 2qkt-a1-m1-cA_2qkt-a1-m4-cB, 2qkt-a1-m2-cA_2qkt-a1-m4-cB, 2qkt-a1-m3-cB_2qkt-a1-m4-cB
6 2qkt-a1-m3-cB 85 85 0.9130 0.9882 0.9882 2.22e-57 2qkt-a1-m3-cB_2qkt-a1-m4-cB
7 2qkt-a1-m2-cA 85 85 0.9130 0.9882 0.9882 2.22e-57 2qkt-a1-m1-cA_2qkt-a1-m2-cA, 2qkt-a1-m2-cA_2qkt-a1-m4-cB
8 2qkt-a1-m1-cA 85 85 0.9130 0.9882 0.9882 2.22e-57 2qkt-a1-m1-cA_2qkt-a1-m2-cA, 2qkt-a1-m1-cA_2qkt-a1-m4-cB
9 2qku-a2-m2-cC 88 86 0.9022 0.9432 0.9651 5.19e-53 2qku-a2-m1-cB_2qku-a2-m2-cC, 2qku-a2-m2-cB_2qku-a2-m2-cC
10 2qku-a2-m2-cB 82 84 0.8804 0.9878 0.9643 4.41e-51 2qku-a2-m2-cB_2qku-a2-m2-cC
11 2qku-a2-m1-cB 82 84 0.8804 0.9878 0.9643 4.41e-51 2qku-a2-m1-cB_2qku-a2-m2-cC
12 7qcr-a1-m1-cA 87 82 0.2174 0.2299 0.2439 2.57e-04 7qcr-a1-m1-cB_7qcr-a1-m1-cA
13 7qcr-a1-m1-cB 86 82 0.2174 0.2326 0.2439 3.02e-04 7qcr-a1-m1-cB_7qcr-a1-m1-cA
14 6nek-a1-m2-cA 86 84 0.2609 0.2791 0.2857 7.39e-04 6nek-a1-m1-cA_6nek-a1-m2-cA
15 6nek-a1-m1-cA 86 84 0.2609 0.2791 0.2857 7.39e-04 6nek-a1-m1-cA_6nek-a1-m2-cA
16 2fne-a4-m1-cB 100 41 0.1739 0.1600 0.3902 0.001 2fne-a4-m1-cB_2fne-a4-m2-cC
17 2fne-a4-m2-cC 104 41 0.1739 0.1538 0.3902 0.001 2fne-a4-m1-cB_2fne-a4-m2-cC
18 2rcz-a1-m1-cA 79 79 0.2391 0.2785 0.2785 0.001 2rcz-a1-m1-cA_2rcz-a1-m1-cB
19 2rcz-a1-m1-cB 81 81 0.2391 0.2716 0.2716 0.001 2rcz-a1-m1-cA_2rcz-a1-m1-cB
20 7wbc-a1-m1-cB 250 47 0.2174 0.0800 0.4255 0.002 7wbc-a1-m1-cA_7wbc-a1-m1-cB
21 7wbc-a1-m1-cA 250 47 0.2174 0.0800 0.4255 0.002 7wbc-a1-m1-cA_7wbc-a1-m1-cB
22 3e17-a1-m1-cB 79 79 0.2609 0.3038 0.3038 0.005 3e17-a1-m1-cB_3e17-a1-m1-cA
23 3e17-a1-m1-cA 80 79 0.2609 0.3000 0.3038 0.005 3e17-a1-m1-cB_3e17-a1-m1-cA
24 3axa-a2-m3-cB 97 88 0.2391 0.2268 0.2500 0.015 3axa-a2-m1-cB_3axa-a2-m3-cB
25 3axa-a2-m1-cB 97 88 0.2391 0.2268 0.2500 0.015 3axa-a2-m1-cB_3axa-a2-m3-cB
26 4q2n-a3-m1-cF 98 89 0.2065 0.1939 0.2135 0.044 4q2n-a3-m1-cE_4q2n-a3-m1-cF
27 4q2n-a3-m1-cE 97 88 0.2065 0.1959 0.2159 0.083 4q2n-a3-m1-cE_4q2n-a3-m1-cF
28 3khf-a3-m1-cB 97 84 0.2174 0.2062 0.2381 0.085 3khf-a3-m1-cA_3khf-a3-m1-cB
29 2x7z-a1-m2-cA 99 82 0.2391 0.2222 0.2683 0.11 2x7z-a1-m1-cA_2x7z-a1-m2-cA
30 2x7z-a1-m1-cA 99 82 0.2391 0.2222 0.2683 0.11 2x7z-a1-m1-cA_2x7z-a1-m2-cA
31 4amh-a1-m1-cB 92 79 0.2283 0.2283 0.2658 0.12 4amh-a1-m1-cB_4amh-a1-m1-cA
32 4amh-a1-m1-cA 94 79 0.2283 0.2234 0.2658 0.13 4amh-a1-m1-cB_4amh-a1-m1-cA
33 2iwp-a1-m1-cA 92 39 0.1522 0.1522 0.3590 0.16 2iwp-a1-m1-cA_2iwp-a1-m1-cB
34 1kwa-a5-m1-cA 88 78 0.1739 0.1818 0.2051 0.16 1kwa-a5-m2-cB_1kwa-a5-m1-cA
35 1kwa-a4-m1-cA 88 78 0.1739 0.1818 0.2051 0.16 1kwa-a4-m1-cB_1kwa-a4-m1-cA
36 3khf-a3-m1-cA 96 84 0.2174 0.2083 0.2381 0.16 3khf-a3-m1-cA_3khf-a3-m1-cB
37 2iwp-a1-m1-cB 106 39 0.1522 0.1321 0.3590 0.23 2iwp-a1-m1-cA_2iwp-a1-m1-cB
38 2w7r-a1-m1-cB 95 45 0.1630 0.1579 0.3333 0.24 2w7r-a1-m1-cA_2w7r-a1-m1-cB
39 2w7r-a1-m1-cA 95 45 0.1630 0.1579 0.3333 0.24 2w7r-a1-m1-cA_2w7r-a1-m1-cB
40 2xkx-a1-m1-cB 718 82 0.2391 0.0306 0.2683 0.29 2xkx-a1-m1-cB_2xkx-a1-m1-cA
41 2xkx-a1-m1-cA 721 82 0.2391 0.0305 0.2683 0.30 2xkx-a1-m1-cB_2xkx-a1-m1-cA
42 3zrt-a1-m1-cA 197 82 0.2391 0.1117 0.2683 0.31 3zrt-a1-m1-cC_3zrt-a1-m1-cA
43 3zrt-a1-m1-cC 188 82 0.2391 0.1170 0.2683 0.34 3zrt-a1-m1-cC_3zrt-a1-m1-cA
44 3rl8-a1-m1-cE 90 82 0.2283 0.2333 0.2561 0.42 3rl8-a1-m1-cE_3rl8-a1-m1-cD
45 3rl8-a1-m1-cB 90 82 0.2283 0.2333 0.2561 0.42 3rl8-a1-m1-cB_3rl8-a1-m1-cA, 3rl8-a1-m1-cB_3rl8-a1-m1-cC
46 3rl8-a1-m1-cD 94 82 0.2283 0.2234 0.2561 0.46 3rl8-a1-m1-cD_3rl8-a1-m1-cC, 3rl8-a1-m1-cE_3rl8-a1-m1-cD
47 3rl8-a1-m1-cA 94 82 0.2283 0.2234 0.2561 0.46 3rl8-a1-m1-cA_3rl8-a1-m1-cC, 3rl8-a1-m1-cB_3rl8-a1-m1-cA
48 3rl8-a1-m1-cC 95 82 0.2283 0.2211 0.2561 0.48 3rl8-a1-m1-cA_3rl8-a1-m1-cC, 3rl8-a1-m1-cB_3rl8-a1-m1-cC, 3rl8-a1-m1-cD_3rl8-a1-m1-cC
49 2v90-a2-m1-cD 93 48 0.1413 0.1398 0.2708 0.99 2v90-a2-m1-cD_2v90-a2-m1-cB, 2v90-a2-m1-cD_2v90-a2-m1-cF
50 2v90-a2-m1-cF 95 48 0.1413 0.1368 0.2708 1.0 2v90-a2-m1-cD_2v90-a2-m1-cF
51 2v90-a2-m1-cB 95 48 0.1413 0.1368 0.2708 1.0 2v90-a2-m1-cD_2v90-a2-m1-cB
52 2z17-a1-m2-cA 94 49 0.1413 0.1383 0.2653 1.8 2z17-a1-m1-cA_2z17-a1-m2-cA
53 2z17-a1-m1-cA 94 49 0.1413 0.1383 0.2653 1.8 2z17-a1-m1-cA_2z17-a1-m2-cA
54 4wsh-a1-m1-cB 347 41 0.1413 0.0375 0.3171 1.8 4wsh-a1-m1-cB_4wsh-a1-m1-cA
55 4wsh-a1-m1-cA 355 41 0.1413 0.0366 0.3171 1.9 4wsh-a1-m1-cB_4wsh-a1-m1-cA
56 1zkk-a1-m1-cA 160 74 0.2065 0.1187 0.2568 2.5 1zkk-a1-m1-cA_1zkk-a1-m1-cB
57 1zkk-a1-m1-cB 161 74 0.2065 0.1180 0.2568 2.5 1zkk-a1-m1-cA_1zkk-a1-m1-cB
58 7mfw-a2-m2-cB 98 60 0.1630 0.1531 0.2500 2.6 7mfw-a2-m1-cA_7mfw-a2-m2-cB
59 7mfw-a1-m1-cB 98 60 0.1630 0.1531 0.2500 2.6 7mfw-a1-m1-cA_7mfw-a1-m1-cB
60 3ps4-a2-m1-cB 97 83 0.1957 0.1856 0.2169 2.7 3ps4-a2-m1-cC_3ps4-a2-m1-cB
61 4ij8-a1-m1-cA 161 74 0.2065 0.1180 0.2568 2.7 4ij8-a1-m1-cB_4ij8-a1-m1-cA
62 5w1y-a1-m1-cA 162 74 0.2065 0.1173 0.2568 2.7 5w1y-a1-m1-cB_5w1y-a1-m1-cA
63 3k8v-a3-m1-cA 323 75 0.2283 0.0650 0.2800 2.8 3k8v-a3-m2-cB_3k8v-a3-m1-cA
64 3k8v-a3-m2-cB 320 75 0.2283 0.0656 0.2800 2.9 3k8v-a3-m2-cB_3k8v-a3-m1-cA
65 5w1y-a1-m1-cB 152 73 0.2065 0.1250 0.2603 3.0 5w1y-a1-m1-cB_5w1y-a1-m1-cA
66 5th7-a1-m1-cB 145 74 0.2065 0.1310 0.2568 3.2 5th7-a1-m1-cA_5th7-a1-m1-cB
67 3ps4-a2-m1-cC 96 83 0.1957 0.1875 0.2169 3.2 3ps4-a2-m1-cC_3ps4-a2-m1-cB
68 7mfw-a2-m1-cA 93 60 0.1630 0.1613 0.2500 3.4 7mfw-a2-m1-cA_7mfw-a2-m2-cB
69 7mfw-a1-m1-cA 93 60 0.1630 0.1613 0.2500 3.4 7mfw-a1-m1-cA_7mfw-a1-m1-cB
70 5th7-a1-m1-cA 143 74 0.2065 0.1329 0.2568 3.7 5th7-a1-m1-cA_5th7-a1-m1-cB
71 3lny-a1-m6-cA 94 48 0.1413 0.1383 0.2708 5.9 3lny-a1-m3-cA_3lny-a1-m6-cA, 3lny-a1-m5-cA_3lny-a1-m6-cA
72 3lny-a1-m5-cA 94 48 0.1413 0.1383 0.2708 5.9 3lny-a1-m5-cA_3lny-a1-m6-cA
73 3lny-a1-m3-cA 94 48 0.1413 0.1383 0.2708 5.9 3lny-a1-m3-cA_3lny-a1-m6-cA
74 3cp8-a2-m1-cD 552 50 0.1848 0.0308 0.3400 8.4 3cp8-a2-m1-cD_3cp8-a2-m1-cC
75 3cp8-a2-m1-cC 611 50 0.1848 0.0278 0.3400 8.6 3cp8-a2-m1-cD_3cp8-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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