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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
GIRLLYLLVKPAGSDETFRAECLRHYESHDVPGLHKYEVRLVAEQPHVDAIGECWFKDDA
AYATYASDIRKAWFEHGKTFIGQLKPFRTAPVA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2ifx-a1-m1-cB 93 93 1.0000 1.0000 1.0000 1.33e-66 2ifx-a1-m1-cB_2ifx-a1-m1-cA
2 2ifx-a1-m1-cA 102 101 1.0000 0.9118 0.9208 2.70e-63 2ifx-a1-m1-cB_2ifx-a1-m1-cA
3 3hfk-a1-m1-cA 115 102 0.6559 0.5304 0.5980 1.03e-33 3hfk-a1-m1-cD_3hfk-a1-m1-cA
4 3hfk-a1-m1-cD 108 102 0.6559 0.5648 0.5980 1.14e-33 3hfk-a1-m1-cD_3hfk-a1-m1-cA
5 3knw-a1-m1-cA 174 62 0.1935 0.1034 0.2903 1.5 3knw-a1-m1-cB_3knw-a1-m1-cA
6 6qgm-a2-m1-cd 526 41 0.1290 0.0228 0.2927 4.5 6qgm-a2-m1-cf_6qgm-a2-m1-cd
7 6qgm-a2-m1-cf 525 41 0.1290 0.0229 0.2927 4.7 6qgm-a2-m1-cf_6qgm-a2-m1-cd
8 1xvs-a1-m1-cB 120 52 0.1613 0.1250 0.2885 5.0 1xvs-a1-m1-cA_1xvs-a1-m1-cB
9 1xvs-a1-m1-cA 120 52 0.1613 0.1250 0.2885 5.0 1xvs-a1-m1-cA_1xvs-a1-m1-cB
10 3js9-a2-m1-cC 148 98 0.2366 0.1486 0.2245 5.7 3js9-a2-m1-cB_3js9-a2-m1-cC
11 3js9-a2-m1-cB 148 98 0.2366 0.1486 0.2245 5.7 3js9-a2-m1-cB_3js9-a2-m1-cC
12 3js9-a1-m2-cC 148 98 0.2366 0.1486 0.2245 5.7 3js9-a1-m1-cA_3js9-a1-m2-cC, 3js9-a1-m1-cB_3js9-a1-m2-cC
13 3js9-a1-m1-cB 148 98 0.2366 0.1486 0.2245 5.7 3js9-a1-m1-cB_3js9-a1-m2-cC
14 3js9-a1-m1-cA 148 98 0.2366 0.1486 0.2245 5.7 3js9-a1-m1-cA_3js9-a1-m2-cC
15 2ae6-a1-m1-cA 144 45 0.1183 0.0764 0.2444 6.3 2ae6-a1-m1-cC_2ae6-a1-m1-cA, 2ae6-a1-m1-cD_2ae6-a1-m1-cA
16 2ae6-a1-m1-cD 141 45 0.1183 0.0780 0.2444 6.9 2ae6-a1-m1-cD_2ae6-a1-m1-cA
17 2ae6-a1-m1-cC 142 45 0.1183 0.0775 0.2444 7.0 2ae6-a1-m1-cC_2ae6-a1-m1-cA
18 3lxu-a1-m2-cX 1192 48 0.1398 0.0109 0.2708 8.1 3lxu-a1-m1-cX_3lxu-a1-m2-cX
19 3lxu-a1-m1-cX 1192 48 0.1398 0.0109 0.2708 8.1 3lxu-a1-m1-cX_3lxu-a1-m2-cX

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Reference:
Jacob Schwartz et al.

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