Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=21)
GIVEQCCTSICSLYQLENYCN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1zei-a1-m1-cF 53 21 1.0000 0.3962 1.0000 3.73e-09 1zei-a1-m1-cE_1zei-a1-m1-cF
2 1zei-a1-m1-cE 53 21 1.0000 0.3962 1.0000 3.73e-09 1zei-a1-m1-cE_1zei-a1-m1-cF
3 7jp3-a1-m1-cE 49 21 1.0000 0.4286 1.0000 4.82e-09 7jp3-a1-m1-cB_7jp3-a1-m1-cE
4 7jp3-a1-m1-cB 49 21 1.0000 0.4286 1.0000 4.82e-09 7jp3-a1-m1-cB_7jp3-a1-m1-cE
5 5bpo-a1-m1-cC 21 21 1.0000 1.0000 1.0000 5.37e-09 5bpo-a1-m1-cA_5bpo-a1-m1-cC
6 5bpo-a1-m1-cA 21 21 1.0000 1.0000 1.0000 5.37e-09 5bpo-a1-m1-cA_5bpo-a1-m1-cC
7 4cy7-a2-m3-cA 21 21 1.0000 1.0000 1.0000 5.37e-09 4cy7-a2-m1-cC_4cy7-a2-m3-cA
8 4cy7-a2-m1-cC 21 21 1.0000 1.0000 1.0000 5.37e-09 4cy7-a2-m1-cC_4cy7-a2-m3-cA
9 2wrx-a1-m1-cC 21 21 1.0000 1.0000 1.0000 5.37e-09 2wrx-a1-m1-cA_2wrx-a1-m1-cC
10 2wrx-a1-m1-cA 21 21 1.0000 1.0000 1.0000 5.37e-09 2wrx-a1-m1-cA_2wrx-a1-m1-cC
11 1xw7-a4-m5-cA 21 21 0.9524 0.9524 0.9524 1.52e-08 1xw7-a4-m4-cA_1xw7-a4-m5-cA
12 1xw7-a4-m4-cA 21 21 0.9524 0.9524 0.9524 1.52e-08 1xw7-a4-m4-cA_1xw7-a4-m5-cA
13 1bph-a4-m3-cA 21 21 0.9048 0.9048 0.9048 3.17e-08 1bph-a4-m1-cA_1bph-a4-m3-cA
14 1bph-a4-m1-cA 21 21 0.9048 0.9048 0.9048 3.17e-08 1bph-a4-m1-cA_1bph-a4-m3-cA
15 5wdm-a1-m1-cE 47 21 0.9048 0.4043 0.9048 6.16e-07 5wdm-a1-m1-cD_5wdm-a1-m1-cE, 5wdm-a1-m1-cF_5wdm-a1-m1-cE
16 5wdm-a1-m1-cD 47 21 0.9048 0.4043 0.9048 6.16e-07 5wdm-a1-m1-cC_5wdm-a1-m1-cD, 5wdm-a1-m1-cD_5wdm-a1-m1-cE
17 5wdm-a1-m1-cA 45 21 0.9048 0.4222 0.9048 6.75e-07 5wdm-a1-m1-cC_5wdm-a1-m1-cA, 5wdm-a1-m1-cF_5wdm-a1-m1-cA
18 5wdm-a1-m1-cF 44 21 0.9048 0.4318 0.9048 6.85e-07 5wdm-a1-m1-cF_5wdm-a1-m1-cA, 5wdm-a1-m1-cF_5wdm-a1-m1-cB, 5wdm-a1-m1-cF_5wdm-a1-m1-cE
19 5wdm-a1-m1-cC 44 21 0.9048 0.4318 0.9048 6.85e-07 5wdm-a1-m1-cC_5wdm-a1-m1-cA, 5wdm-a1-m1-cC_5wdm-a1-m1-cB, 5wdm-a1-m1-cC_5wdm-a1-m1-cD
20 5wdm-a1-m1-cB 46 21 0.9048 0.4130 0.9048 6.96e-07 5wdm-a1-m1-cC_5wdm-a1-m1-cB, 5wdm-a1-m1-cF_5wdm-a1-m1-cB
21 3mtg-a1-m2-cB 423 16 0.4286 0.0213 0.5625 5.0 3mtg-a1-m1-cB_3mtg-a1-m2-cB, 3mtg-a1-m2-cB_3mtg-a1-m1-cA, 3mtg-a1-m2-cB_3mtg-a1-m2-cA
22 3mtg-a1-m1-cB 423 16 0.4286 0.0213 0.5625 5.0 3mtg-a1-m1-cB_3mtg-a1-m2-cB
23 3mtg-a1-m2-cA 430 16 0.4286 0.0209 0.5625 5.4 3mtg-a1-m2-cB_3mtg-a1-m2-cA
24 3mtg-a1-m1-cA 430 16 0.4286 0.0209 0.5625 5.4 3mtg-a1-m2-cB_3mtg-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600