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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=92)
GIVNVPNCNTTKYQQLARTAVAIYNYHEQAHLTFVENLNCKEQLGEGDYYYITLAATDDA
GKKAIYEAKIGVVESAGWTGVEEFKLVGSLEH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5kux-a2-m2-cA 92 92 1.0000 1.0000 1.0000 8.76e-65 5kux-a2-m1-cA_5kux-a2-m2-cA
2 5kux-a2-m1-cA 92 92 1.0000 1.0000 1.0000 8.76e-65 5kux-a2-m1-cA_5kux-a2-m2-cA
3 5ohv-a1-m1-cB 89 91 0.4022 0.4157 0.4066 5.01e-10 5ohv-a1-m1-cB_5ohv-a1-m1-cD
4 5ohv-a1-m1-cD 90 91 0.4022 0.4111 0.4066 5.18e-10 5ohv-a1-m1-cB_5ohv-a1-m1-cD
5 6vlp-a1-m2-cA 80 76 0.3261 0.3750 0.3947 6.58e-10 6vlp-a1-m1-cA_6vlp-a1-m2-cA
6 6vlp-a1-m1-cA 80 76 0.3261 0.3750 0.3947 6.58e-10 6vlp-a1-m1-cA_6vlp-a1-m2-cA
7 5ohl-a4-m1-cE 89 90 0.3804 0.3933 0.3889 1.76e-08 5ohl-a4-m1-cB_5ohl-a4-m1-cE
8 5ohl-a4-m1-cB 89 90 0.3804 0.3933 0.3889 1.76e-08 5ohl-a4-m1-cB_5ohl-a4-m1-cE
9 5a0o-a1-m1-cS 93 93 0.3804 0.3763 0.3763 2.06e-08 5a0o-a1-m1-cB_5a0o-a1-m1-cS
10 5a0o-a1-m1-cB 93 93 0.3804 0.3763 0.3763 2.06e-08 5a0o-a1-m1-cB_5a0o-a1-m1-cS
11 4tx4-a1-m1-cA 83 80 0.3152 0.3494 0.3625 1.77e-07 4tx4-a1-m1-cB_4tx4-a1-m1-cA
12 4tx4-a1-m1-cB 79 73 0.3043 0.3544 0.3836 7.50e-07 4tx4-a1-m1-cB_4tx4-a1-m1-cA
13 3ul5-a1-m1-cB 81 78 0.2717 0.3086 0.3205 3.92e-04 3ul5-a1-m1-cB_3ul5-a1-m1-cA
14 3ul5-a1-m1-cA 82 78 0.2717 0.3049 0.3205 4.04e-04 3ul5-a1-m1-cB_3ul5-a1-m1-cA
15 7c03-a2-m2-cA 312 74 0.2174 0.0641 0.2703 0.27 7c03-a2-m1-cA_7c03-a2-m2-cA
16 7c03-a2-m1-cA 312 74 0.2174 0.0641 0.2703 0.27 7c03-a2-m1-cA_7c03-a2-m2-cA
17 1am2-a1-m2-cA 181 38 0.1196 0.0608 0.2895 0.76 1am2-a1-m1-cA_1am2-a1-m2-cA
18 1am2-a1-m1-cA 181 38 0.1196 0.0608 0.2895 0.76 1am2-a1-m1-cA_1am2-a1-m2-cA
19 3hq1-a1-m1-cB 576 34 0.1413 0.0226 0.3824 9.1 3hq1-a1-m1-cA_3hq1-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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