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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=58)
GKARMRWTPELHEAFVEAVNSLGGSERATPKGVLKIMKVEGLTIYHVKSHLQKYRTAR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6j4k-a1-m1-cB 58 58 1.0000 1.0000 1.0000 3.20e-38 6j4k-a1-m1-cB_6j4k-a1-m1-cA
2 6j4k-a1-m1-cA 60 58 1.0000 0.9667 1.0000 3.37e-38 6j4k-a1-m1-cB_6j4k-a1-m1-cA
3 7d3t-a2-m1-cD 62 56 0.8103 0.7581 0.8393 3.83e-31 7d3t-a2-m1-cC_7d3t-a2-m1-cD
4 7d3t-a2-m1-cC 59 56 0.8103 0.7966 0.8393 4.37e-31 7d3t-a2-m1-cC_7d3t-a2-m1-cD
5 7d3y-a1-m1-cC 103 55 0.8103 0.4563 0.8545 4.46e-31 7d3y-a1-m1-cE_7d3y-a1-m1-cC
6 2yx7-a1-m8-cA 150 36 0.2586 0.1000 0.4167 0.32 2yx7-a1-m2-cA_2yx7-a1-m8-cA, 2yx7-a1-m4-cA_2yx7-a1-m8-cA, 2yx7-a1-m6-cA_2yx7-a1-m8-cA
7 2yx7-a1-m6-cA 150 36 0.2586 0.1000 0.4167 0.32 2yx7-a1-m6-cA_2yx7-a1-m8-cA
8 2yx7-a1-m4-cA 150 36 0.2586 0.1000 0.4167 0.32 2yx7-a1-m4-cA_2yx7-a1-m8-cA
9 2yx7-a1-m2-cA 150 36 0.2586 0.1000 0.4167 0.32 2yx7-a1-m2-cA_2yx7-a1-m8-cA
10 2dfa-a1-m4-cA 247 57 0.2759 0.0648 0.2807 3.6 2dfa-a1-m1-cA_2dfa-a1-m4-cA, 2dfa-a1-m2-cA_2dfa-a1-m4-cA, 2dfa-a1-m3-cA_2dfa-a1-m4-cA
11 2dfa-a1-m3-cA 247 57 0.2759 0.0648 0.2807 3.6 2dfa-a1-m3-cA_2dfa-a1-m4-cA
12 2dfa-a1-m2-cA 247 57 0.2759 0.0648 0.2807 3.6 2dfa-a1-m2-cA_2dfa-a1-m4-cA
13 2dfa-a1-m1-cA 247 57 0.2759 0.0648 0.2807 3.6 2dfa-a1-m1-cA_2dfa-a1-m4-cA
14 8avb-a1-m1-cF 593 47 0.2931 0.0287 0.3617 6.1 8avb-a1-m1-cB_8avb-a1-m1-cF
15 8avb-a1-m1-cB 593 47 0.2931 0.0287 0.3617 6.1 8avb-a1-m1-cB_8avb-a1-m1-cF
16 8avf-a1-m1-cD 596 19 0.1552 0.0151 0.4737 7.6 8avf-a1-m1-cB_8avf-a1-m1-cD
17 8avf-a1-m1-cB 596 19 0.1552 0.0151 0.4737 7.6 8avf-a1-m1-cB_8avf-a1-m1-cD
18 5w74-a1-m2-cG 477 44 0.2586 0.0314 0.3409 7.8 5w74-a1-m1-cE_5w74-a1-m2-cG
19 5w74-a1-m2-cE 477 44 0.2586 0.0314 0.3409 7.8 5w74-a1-m2-cD_5w74-a1-m2-cE
20 5w74-a1-m2-cD 477 44 0.2586 0.0314 0.3409 7.8 5w74-a1-m2-cD_5w74-a1-m2-cE
21 5w74-a1-m1-cE 477 44 0.2586 0.0314 0.3409 7.8 5w74-a1-m1-cE_5w74-a1-m2-cG
22 3los-a1-m1-cP 532 44 0.2586 0.0282 0.3409 7.9 3los-a1-m1-cB_3los-a1-m1-cP
23 3los-a1-m1-cB 532 44 0.2586 0.0282 0.3409 7.9 3los-a1-m1-cB_3los-a1-m1-cP
24 3izh-a1-m1-cP 513 44 0.2586 0.0292 0.3409 8.0 3izh-a1-m1-cB_3izh-a1-m1-cP, 3izh-a1-m1-cO_3izh-a1-m1-cP
25 3izh-a1-m1-cO 513 44 0.2586 0.0292 0.3409 8.0 3izh-a1-m1-cO_3izh-a1-m1-cP
26 3izh-a1-m1-cB 513 44 0.2586 0.0292 0.3409 8.0 3izh-a1-m1-cB_3izh-a1-m1-cP
27 3ruv-a1-m4-cD 516 44 0.2586 0.0291 0.3409 8.3 3ruv-a1-m1-cD_3ruv-a1-m4-cD
28 3ruv-a1-m1-cD 516 44 0.2586 0.0291 0.3409 8.3 3ruv-a1-m1-cD_3ruv-a1-m4-cD
29 3kfb-a1-m2-cE 509 44 0.2586 0.0295 0.3409 8.4 3kfb-a1-m2-cD_3kfb-a1-m2-cE
30 3kfb-a1-m2-cD 509 44 0.2586 0.0295 0.3409 8.4 3kfb-a1-m2-cD_3kfb-a1-m2-cE
31 7z1u-a1-m1-cB 142 22 0.1552 0.0634 0.4091 10.0 7z1u-a1-m1-cB_7z1u-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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