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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=87)
GKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYT
FATRKLQPMITSETGKALIQTCLNSPD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1hbx-a1-m1-cA 87 87 1.0000 1.0000 1.0000 6.55e-60 1hbx-a1-m1-cB_1hbx-a1-m1-cA
2 1hbx-a1-m1-cB 86 86 0.9885 1.0000 1.0000 4.69e-59 1hbx-a1-m1-cB_1hbx-a1-m1-cA
3 1mnm-a1-m1-cB 81 81 0.6322 0.6790 0.6790 1.09e-36 1mnm-a1-m1-cB_1mnm-a1-m1-cA
4 1mnm-a1-m1-cA 85 81 0.6322 0.6471 0.6790 1.12e-36 1mnm-a1-m1-cB_1mnm-a1-m1-cA
5 7nb0-a2-m1-cB 57 41 0.2184 0.3333 0.4634 1.49e-08 7nb0-a2-m1-cD_7nb0-a2-m1-cB
6 7nb0-a2-m1-cD 55 41 0.2184 0.3455 0.4634 1.70e-08 7nb0-a2-m1-cD_7nb0-a2-m1-cB
7 5f28-a3-m2-cD 72 47 0.2069 0.2500 0.3830 1.29e-07 5f28-a3-m2-cC_5f28-a3-m2-cD
8 5f28-a3-m2-cC 72 47 0.2069 0.2500 0.3830 1.29e-07 5f28-a3-m2-cC_5f28-a3-m2-cD
9 4qe0-a2-m2-cB 144 38 0.1264 0.0764 0.2895 4.6 4qe0-a2-m2-cB_4qe0-a2-m2-cA
10 4qe0-a2-m2-cA 155 38 0.1264 0.0710 0.2895 5.7 4qe0-a2-m1-cA_4qe0-a2-m2-cA, 4qe0-a2-m2-cB_4qe0-a2-m2-cA
11 4qe0-a2-m1-cA 155 38 0.1264 0.0710 0.2895 5.7 4qe0-a2-m1-cA_4qe0-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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