Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
GKLKQRSIKAEGDGIVGEGKALYNNEGGRTFMYAFISDKPDLRVVKWGGCNTIELEPPRK
FLVDSPNGAQIKYLYFVRNLNTLRRGAVLGYIGATV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5hiz-a1-m1-cB 96 96 1.0000 1.0000 1.0000 2.70e-67 5hiz-a1-m1-cA_5hiz-a1-m1-cB
2 5hiz-a1-m1-cA 96 96 1.0000 1.0000 1.0000 2.70e-67 5hiz-a1-m1-cA_5hiz-a1-m1-cB
3 2j98-a1-m1-cB 102 100 0.6771 0.6373 0.6500 6.97e-43 2j98-a1-m1-cB_2j98-a1-m1-cA
4 2j98-a1-m1-cA 106 100 0.6771 0.6132 0.6500 7.95e-43 2j98-a1-m1-cB_2j98-a1-m1-cA
5 2j97-a1-m2-cA 98 99 0.6250 0.6122 0.6061 1.57e-36 2j97-a1-m1-cA_2j97-a1-m2-cA
6 2j97-a1-m1-cA 98 99 0.6250 0.6122 0.6061 1.57e-36 2j97-a1-m1-cA_2j97-a1-m2-cA
7 8dqu-a1-m6-cC 78 81 0.3854 0.4744 0.4568 6.37e-11 8dqu-a1-m6-cF_8dqu-a1-m6-cC
8 8dqu-a1-m6-cF 74 80 0.3750 0.4865 0.4500 2.77e-10 8dqu-a1-m6-cF_8dqu-a1-m6-cC
9 5c94-a1-m2-cA 116 83 0.2812 0.2328 0.3253 1.36e-09 5c94-a1-m1-cA_5c94-a1-m2-cA
10 5c94-a1-m1-cA 116 83 0.2812 0.2328 0.3253 1.36e-09 5c94-a1-m1-cA_5c94-a1-m2-cA
11 5ym6-a2-m1-cC 99 78 0.2604 0.2525 0.3205 5.71e-09 5ym6-a2-m1-cD_5ym6-a2-m1-cC
12 5ym6-a2-m1-cD 95 67 0.2292 0.2316 0.3284 2.23e-06 5ym6-a2-m1-cD_5ym6-a2-m1-cC
13 5ohv-a1-m1-cD 90 28 0.1146 0.1222 0.3929 8.0 5ohv-a1-m1-cB_5ohv-a1-m1-cD
14 5ohv-a1-m1-cB 89 28 0.1146 0.1236 0.3929 8.1 5ohv-a1-m1-cB_5ohv-a1-m1-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600