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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=92)
GKLNKLVEHIKELLQQLNKNWHRHQGNLHDNQQEQLFQEFQHFQGNQDDGKLQNIHEQQF
NQVDNHLQSESDTVHHFHNKLQELNNFHHLVH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3vjf-a1-m1-cA 92 92 1.0000 1.0000 1.0000 4.74e-58 3vjf-a1-m1-cB_3vjf-a1-m1-cA
2 3vjf-a1-m1-cB 83 90 0.9022 1.0000 0.9222 3.72e-48 3vjf-a1-m1-cB_3vjf-a1-m1-cA
3 6kos-a1-m1-cA 101 99 0.9130 0.8317 0.8485 4.28e-43 6kos-a1-m1-cB_6kos-a1-m1-cA
4 6kos-a1-m1-cB 97 97 0.8913 0.8454 0.8454 3.60e-41 6kos-a1-m1-cB_6kos-a1-m1-cA
5 6gua-a4-m1-cH 819 87 0.2065 0.0232 0.2184 0.083 6gua-a4-m1-cH_6gua-a4-m1-cG
6 6gua-a4-m1-cG 820 87 0.2065 0.0232 0.2184 0.083 6gua-a4-m1-cH_6gua-a4-m1-cG

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Reference:
Jacob Schwartz et al.

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