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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=68)
GKNPVELNEKRRGLKYELISETGGSHDKRFVEVEVDGQKFQGAGSNKKVAKAYAALAALE
KLFPDTPL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3p1x-a3-m1-cA 68 68 1.0000 1.0000 1.0000 6.21e-45 3p1x-a3-m1-cB_3p1x-a3-m1-cA
2 3p1x-a3-m1-cB 64 64 0.9412 1.0000 1.0000 2.35e-41 3p1x-a3-m1-cB_3p1x-a3-m1-cA
3 7e4v-a1-m1-cA 74 41 0.2353 0.2162 0.3902 0.15 7e4v-a1-m1-cA_7e4v-a1-m1-cB
4 7e4v-a1-m1-cB 75 41 0.2353 0.2133 0.3902 0.17 7e4v-a1-m1-cA_7e4v-a1-m1-cB
5 3l12-a1-m1-cB 285 52 0.2059 0.0491 0.2692 0.35 3l12-a1-m1-cB_3l12-a1-m1-cA
6 3l12-a1-m1-cA 286 52 0.2059 0.0490 0.2692 0.35 3l12-a1-m1-cB_3l12-a1-m1-cA
7 1mkb-a1-m1-cB 171 18 0.1471 0.0585 0.5556 2.1 1mkb-a1-m1-cA_1mkb-a1-m1-cB
8 1mkb-a1-m1-cA 171 18 0.1471 0.0585 0.5556 2.1 1mkb-a1-m1-cA_1mkb-a1-m1-cB
9 4m30-a1-m1-cA 220 41 0.2500 0.0773 0.4146 2.1 4m30-a1-m1-cB_4m30-a1-m1-cA
10 2cf2-a1-m1-cL 342 18 0.1471 0.0292 0.5556 2.2 2cf2-a1-m1-cC_2cf2-a1-m1-cL
11 2cf2-a1-m1-cL 342 18 0.1471 0.0292 0.5556 2.2 2cf2-a1-m1-cC_2cf2-a1-m1-cL
12 2cf2-a1-m1-cC 342 18 0.1471 0.0292 0.5556 2.2 2cf2-a1-m1-cC_2cf2-a1-m1-cL
13 2cf2-a1-m1-cC 342 18 0.1471 0.0292 0.5556 2.2 2cf2-a1-m1-cC_2cf2-a1-m1-cL
14 1yyw-a2-m1-cD 219 41 0.2500 0.0776 0.4146 2.2 1yyw-a2-m1-cC_1yyw-a2-m1-cD
15 4m30-a1-m1-cB 218 41 0.2500 0.0780 0.4146 2.3 4m30-a1-m1-cB_4m30-a1-m1-cA
16 1yyw-a2-m1-cC 218 41 0.2500 0.0780 0.4146 2.3 1yyw-a2-m1-cC_1yyw-a2-m1-cD
17 5hd6-a4-m1-cD 166 16 0.1471 0.0602 0.6250 5.1 5hd6-a4-m1-cH_5hd6-a4-m1-cD
18 5hd6-a4-m1-cH 163 16 0.1471 0.0613 0.6250 5.5 5hd6-a4-m1-cH_5hd6-a4-m1-cD

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Reference:
Jacob Schwartz et al.

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