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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
GKRPGAIPTVQIDNERVKVTEWRFPPGGETGWHRHSDYVVVPTTGPLLLETPEGSVTSQL
TRGVSYTRPEGVEHNVINPSDTEFVFVEIEIKA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2fqp-a3-m1-cC 93 93 1.0000 1.0000 1.0000 7.67e-64 2fqp-a3-m2-cB_2fqp-a3-m1-cC
2 2fqp-a3-m2-cA 92 92 0.9892 1.0000 1.0000 4.17e-63 2fqp-a3-m1-cD_2fqp-a3-m2-cA, 2fqp-a3-m2-cB_2fqp-a3-m2-cA
3 2fqp-a3-m1-cD 92 91 0.9785 0.9891 1.0000 2.39e-62 2fqp-a3-m1-cD_2fqp-a3-m2-cA
4 2fqp-a3-m2-cB 90 90 0.9677 1.0000 1.0000 2.18e-61 2fqp-a3-m2-cB_2fqp-a3-m1-cC, 2fqp-a3-m2-cB_2fqp-a3-m2-cA
5 3lag-a1-m1-cA 92 90 0.5054 0.5109 0.5222 1.79e-26 3lag-a1-m1-cA_3lag-a1-m1-cB
6 3lag-a1-m1-cB 93 90 0.5054 0.5054 0.5222 2.12e-26 3lag-a1-m1-cA_3lag-a1-m1-cB
7 4bwp-a1-m1-cB 372 68 0.2258 0.0565 0.3088 0.27 4bwp-a1-m1-cB_4bwp-a1-m1-cA
8 4rd7-a1-m2-cA 114 62 0.2151 0.1754 0.3226 0.28 4rd7-a1-m1-cA_4rd7-a1-m2-cA
9 4rd7-a1-m1-cA 114 62 0.2151 0.1754 0.3226 0.28 4rd7-a1-m1-cA_4rd7-a1-m2-cA
10 4bwp-a1-m1-cA 386 68 0.2151 0.0518 0.2941 0.32 4bwp-a1-m1-cB_4bwp-a1-m1-cA
11 1j3q-a1-m1-cA 187 67 0.2151 0.1070 0.2985 0.58 1j3q-a1-m1-cB_1j3q-a1-m1-cA
12 1j3q-a1-m1-cB 183 67 0.2151 0.1093 0.2985 0.69 1j3q-a1-m1-cB_1j3q-a1-m1-cA
13 2cv6-a1-m3-cA 366 53 0.1720 0.0437 0.3019 1.4 2cv6-a1-m2-cA_2cv6-a1-m3-cA
14 2cv6-a1-m2-cA 366 53 0.1720 0.0437 0.3019 1.4 2cv6-a1-m2-cA_2cv6-a1-m3-cA
15 2px7-a1-m1-cB 202 36 0.1398 0.0644 0.3611 3.8 2px7-a1-m1-cB_2px7-a1-m1-cA
16 2px7-a1-m1-cA 203 36 0.1398 0.0640 0.3611 3.8 2px7-a1-m1-cB_2px7-a1-m1-cA
17 2eaa-a1-m1-cC 377 77 0.2366 0.0584 0.2857 6.4 2eaa-a1-m1-cA_2eaa-a1-m1-cC
18 2eaa-a1-m1-cA 375 77 0.2366 0.0587 0.2857 6.5 2eaa-a1-m1-cA_2eaa-a1-m1-cC
19 5uvn-a1-m1-cF 416 95 0.2473 0.0553 0.2421 7.6 5uvn-a1-m1-cE_5uvn-a1-m1-cF
20 5uvn-a1-m1-cE 416 95 0.2473 0.0553 0.2421 7.6 5uvn-a1-m1-cE_5uvn-a1-m1-cF

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Reference:
Jacob Schwartz et al.

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