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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
GKSPTEVLLELIAEASGTTREEVKEKFLKELRKGKSPTEVLLELIAEASGTTKEEVKEKF
LKELSFGKSPTEVLLELIAEASGTTKEEVKKKFWKELSL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4yy5-a3-m1-cB 99 99 1.0000 1.0000 1.0000 6.14e-60 4yy5-a3-m1-cA_4yy5-a3-m1-cB
2 4yy5-a3-m1-cA 97 97 0.9798 1.0000 1.0000 1.33e-58 4yy5-a3-m1-cA_4yy5-a3-m1-cB
3 4yy5-a3-m1-cA 97 65 0.6061 0.6186 0.9231 3.09e-31 4yy5-a3-m1-cA_4yy5-a3-m1-cB
4 2qib-a1-m1-cA 217 32 0.1313 0.0599 0.4062 3.2 2qib-a1-m1-cB_2qib-a1-m1-cA
5 2c8u-a1-m1-cB 202 76 0.2626 0.1287 0.3421 3.4 2c8u-a1-m1-cA_2c8u-a1-m1-cB
6 2c8u-a1-m1-cA 202 76 0.2626 0.1287 0.3421 3.4 2c8u-a1-m1-cA_2c8u-a1-m1-cB
7 2qib-a1-m1-cB 204 32 0.1313 0.0637 0.4062 3.6 2qib-a1-m1-cB_2qib-a1-m1-cA
8 2f8f-a2-m1-cA 203 76 0.2626 0.1281 0.3421 3.8 2f8f-a2-m1-cA_2f8f-a2-m2-cB
9 2f8f-a2-m2-cB 203 76 0.2626 0.1281 0.3421 3.9 2f8f-a2-m1-cA_2f8f-a2-m2-cB
10 1s9r-a1-m1-cB 409 59 0.1616 0.0391 0.2712 5.7 1s9r-a1-m1-cA_1s9r-a1-m1-cB
11 1s9r-a1-m1-cA 409 59 0.1616 0.0391 0.2712 5.7 1s9r-a1-m1-cA_1s9r-a1-m1-cB
12 4p5w-a1-m1-cB 306 67 0.2121 0.0686 0.3134 7.6 4p5w-a1-m1-cB_4p5w-a1-m1-cA
13 4p5w-a1-m1-cA 312 67 0.2121 0.0673 0.3134 8.6 4p5w-a1-m1-cB_4p5w-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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