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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=67)
GKVYKKVELVGTSEEGLEAAIQAALARARKTLRHLDWFEVKEIRGTIGEAGVKEYQVVLE
VGFRLEE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2v21-a1-m2-cF 67 67 1.0000 1.0000 1.0000 1.65e-41 2v21-a1-m2-cB_2v21-a1-m2-cF, 2v21-a1-m2-cE_2v21-a1-m2-cF
2 2v21-a1-m2-cE 67 67 1.0000 1.0000 1.0000 1.65e-41 2v21-a1-m2-cE_2v21-a1-m2-cF
3 2v21-a1-m2-cB 67 67 1.0000 1.0000 1.0000 1.65e-41 2v21-a1-m2-cB_2v21-a1-m2-cF
4 2yiz-a1-m3-cD 68 64 0.5224 0.5147 0.5469 2.39e-22 2yiz-a1-m2-cC_2yiz-a1-m3-cD, 2yiz-a1-m3-cB_2yiz-a1-m3-cD
5 2yiz-a1-m3-cB 68 64 0.5224 0.5147 0.5469 2.39e-22 2yiz-a1-m3-cB_2yiz-a1-m3-cD
6 2yiz-a1-m2-cC 68 64 0.5224 0.5147 0.5469 2.39e-22 2yiz-a1-m2-cC_2yiz-a1-m3-cD
7 2vxa-a1-m1-cL 66 65 0.5224 0.5303 0.5385 7.59e-18 2vxa-a1-m1-cE_2vxa-a1-m1-cL, 2vxa-a1-m1-cK_2vxa-a1-m1-cL
8 2vxa-a1-m1-cK 66 65 0.5224 0.5303 0.5385 7.59e-18 2vxa-a1-m1-cK_2vxa-a1-m1-cL
9 2vxa-a1-m1-cE 66 65 0.5224 0.5303 0.5385 7.59e-18 2vxa-a1-m1-cE_2vxa-a1-m1-cL
10 3onr-a1-m1-cC 70 63 0.3134 0.3000 0.3333 2.62e-05 3onr-a1-m1-cB_3onr-a1-m1-cC
11 3onr-a1-m1-cB 70 63 0.3134 0.3000 0.3333 2.62e-05 3onr-a1-m1-cB_3onr-a1-m1-cC
12 3onr-a1-m1-cK 67 63 0.3134 0.3134 0.3333 2.66e-05 3onr-a1-m1-cD_3onr-a1-m1-cK
13 3onr-a1-m1-cD 67 63 0.3134 0.3134 0.3333 2.66e-05 3onr-a1-m1-cD_3onr-a1-m1-cK
14 1wl4-a1-m4-cA 393 35 0.1940 0.0331 0.3714 5.7 1wl4-a1-m1-cA_1wl4-a1-m4-cA, 1wl4-a1-m2-cA_1wl4-a1-m4-cA, 1wl4-a1-m3-cA_1wl4-a1-m4-cA
15 1wl4-a1-m3-cA 393 35 0.1940 0.0331 0.3714 5.7 1wl4-a1-m3-cA_1wl4-a1-m4-cA
16 1wl4-a1-m2-cA 393 35 0.1940 0.0331 0.3714 5.7 1wl4-a1-m2-cA_1wl4-a1-m4-cA
17 1wl4-a1-m1-cA 393 35 0.1940 0.0331 0.3714 5.7 1wl4-a1-m1-cA_1wl4-a1-m4-cA
18 6bn2-a1-m2-cA 391 34 0.1940 0.0332 0.3824 5.9 6bn2-a1-m1-cA_6bn2-a1-m2-cA
19 6bn2-a1-m1-cA 391 34 0.1940 0.0332 0.3824 5.9 6bn2-a1-m1-cA_6bn2-a1-m2-cA
20 6hlu-a1-m1-cB 896 44 0.1791 0.0134 0.2727 6.6 6hlu-a1-m1-cB_6hlu-a1-m1-cA
21 6hlu-a1-m1-cA 908 44 0.1791 0.0132 0.2727 6.6 6hlu-a1-m1-cB_6hlu-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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