Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=54)
GKWREQLGQKFEEIRWLIEEVRHRLKITENSFEQITFMQALQLLLEVEQEIRTF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1pd3-a4-m2-cB 54 54 1.0000 1.0000 1.0000 3.57e-32 1pd3-a4-m1-cA_1pd3-a4-m2-cB
2 1pd3-a4-m1-cA 54 54 1.0000 1.0000 1.0000 3.57e-32 1pd3-a4-m1-cA_1pd3-a4-m2-cB
3 1pd3-a3-m1-cB 54 54 1.0000 1.0000 1.0000 3.57e-32 1pd3-a3-m1-cA_1pd3-a3-m1-cB
4 1pd3-a3-m1-cA 54 54 1.0000 1.0000 1.0000 3.57e-32 1pd3-a3-m1-cA_1pd3-a3-m1-cB
5 6f6p-a1-m1-cD 98 36 0.2407 0.1327 0.3611 7.8 6f6p-a1-m1-cB_6f6p-a1-m1-cD, 6f6p-a1-m1-cC_6f6p-a1-m1-cD
6 6f6p-a1-m1-cC 89 36 0.2407 0.1461 0.3611 8.6 6f6p-a1-m1-cC_6f6p-a1-m1-cD
7 6f6p-a1-m1-cB 97 36 0.2407 0.1340 0.3611 8.6 6f6p-a1-m1-cB_6f6p-a1-m1-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600