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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=30)
GLAKWFGSDLQQPLPSPAKVISVDELEYRQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6f9w-a1-m2-cB 30 30 1.0000 1.0000 1.0000 2.08e-16 6f9w-a1-m1-cB_6f9w-a1-m2-cB
2 6f9w-a1-m1-cB 30 30 1.0000 1.0000 1.0000 2.08e-16 6f9w-a1-m1-cB_6f9w-a1-m2-cB
3 3b12-a1-m1-cB 294 22 0.4000 0.0408 0.5455 0.40 3b12-a1-m1-cA_3b12-a1-m1-cB
4 3b12-a1-m1-cA 294 22 0.4000 0.0408 0.5455 0.40 3b12-a1-m1-cA_3b12-a1-m1-cB
5 5dvy-a1-m2-cA 628 27 0.3667 0.0175 0.4074 3.5 5dvy-a1-m1-cA_5dvy-a1-m2-cA
6 5dvy-a1-m1-cA 628 27 0.3667 0.0175 0.4074 3.5 5dvy-a1-m1-cA_5dvy-a1-m2-cA
7 3kgl-a1-m1-cC 387 30 0.4000 0.0310 0.4000 7.0 3kgl-a1-m1-cB_3kgl-a1-m1-cC
8 3kgl-a1-m1-cB 387 30 0.4000 0.0310 0.4000 7.0 3kgl-a1-m1-cB_3kgl-a1-m1-cC
9 3u1d-a1-m1-cB 141 20 0.3667 0.0780 0.5500 7.5 3u1d-a1-m1-cB_3u1d-a1-m1-cA
10 3u1d-a1-m1-cA 145 20 0.3667 0.0759 0.5500 7.5 3u1d-a1-m1-cB_3u1d-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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