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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
GLFHQVFFWLKNPGDKADRDKLIAGLKALKAIDVIQQLHVGVPAATEKRDVVDNSYDVSE
LVFKSVEDQKRYRDHPLLQKFVADCSHLWSKVVVYDSSV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3bn7-a1-m2-cA 99 99 1.0000 1.0000 1.0000 5.85e-69 3bn7-a1-m1-cA_3bn7-a1-m2-cA
2 3bn7-a1-m1-cA 99 99 1.0000 1.0000 1.0000 5.85e-69 3bn7-a1-m1-cA_3bn7-a1-m2-cA
3 2pff-a1-m2-cH 2006 36 0.1414 0.0070 0.3889 1.4 2pff-a1-m2-cE_2pff-a1-m2-cH
4 2pff-a1-m2-cE 2006 36 0.1414 0.0070 0.3889 1.4 2pff-a1-m2-cE_2pff-a1-m2-cH
5 6hun-a1-m2-cA 428 74 0.1919 0.0444 0.2568 2.9 6hun-a1-m1-cA_6hun-a1-m2-cA
6 6hun-a1-m1-cA 428 74 0.1919 0.0444 0.2568 2.9 6hun-a1-m1-cA_6hun-a1-m2-cA
7 2pid-a1-m1-cA 317 36 0.1313 0.0410 0.3611 6.1 2pid-a1-m1-cA_2pid-a1-m1-cB
8 2pid-a1-m1-cB 324 36 0.1313 0.0401 0.3611 6.1 2pid-a1-m1-cA_2pid-a1-m1-cB
9 7q5s-a1-m1-cK 2039 37 0.1212 0.0059 0.3243 7.5 7q5s-a1-m1-cI_7q5s-a1-m1-cK
10 7q5s-a1-m1-cI 2039 37 0.1212 0.0059 0.3243 7.5 7q5s-a1-m1-cI_7q5s-a1-m1-cK
11 6wqh-a1-m1-cF 537 27 0.1111 0.0205 0.4074 8.0 6wqh-a1-m1-cA_6wqh-a1-m1-cF
12 6wqh-a1-m1-cD 537 27 0.1111 0.0205 0.4074 8.0 6wqh-a1-m1-cD_6wqh-a1-m1-cC
13 6wqh-a1-m1-cA 537 27 0.1111 0.0205 0.4074 8.0 6wqh-a1-m1-cA_6wqh-a1-m1-cF
14 4ypl-a1-m1-cE 537 27 0.1111 0.0205 0.4074 8.0 4ypl-a1-m1-cD_4ypl-a1-m1-cE
15 4ypl-a1-m1-cD 537 27 0.1111 0.0205 0.4074 8.0 4ypl-a1-m1-cD_4ypl-a1-m1-cE, 4ypl-a1-m1-cD_4ypl-a1-m1-cF
16 4ypl-a1-m1-cB 537 27 0.1111 0.0205 0.4074 8.0 4ypl-a1-m1-cA_4ypl-a1-m1-cB
17 4ypl-a1-m1-cA 537 27 0.1111 0.0205 0.4074 8.0 4ypl-a1-m1-cA_4ypl-a1-m1-cB
18 6wqh-a1-m1-cC 538 27 0.1111 0.0204 0.4074 8.0 6wqh-a1-m1-cD_6wqh-a1-m1-cC
19 4ypl-a1-m1-cF 538 27 0.1111 0.0204 0.4074 8.0 4ypl-a1-m1-cD_4ypl-a1-m1-cF

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Reference:
Jacob Schwartz et al.

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