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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=79)
GLLDGKKEFSQLEEKNKDTIHTSKSGGGVSVSFNGLGELVDLQIDDSLLEDKEAQIYLSA
LNDGYKAVEENRKNLAFNL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3f42-a1-m2-cB 79 79 1.0000 1.0000 1.0000 3.09e-51 3f42-a1-m2-cB_3f42-a1-m1-cA, 3f42-a1-m2-cB_3f42-a1-m2-cA
2 3f42-a1-m2-cA 87 79 1.0000 0.9080 1.0000 6.43e-51 3f42-a1-m1-cA_3f42-a1-m2-cA, 3f42-a1-m2-cB_3f42-a1-m2-cA
3 3f42-a1-m1-cA 87 79 1.0000 0.9080 1.0000 6.43e-51 3f42-a1-m1-cA_3f42-a1-m2-cA, 3f42-a1-m2-cB_3f42-a1-m1-cA
4 1pug-a2-m1-cD 75 72 0.3165 0.3333 0.3472 7.88e-04 1pug-a2-m1-cD_1pug-a2-m1-cC
5 1pug-a2-m1-cC 80 72 0.3165 0.3125 0.3472 0.001 1pug-a2-m1-cD_1pug-a2-m1-cC
6 1j8b-a1-m2-cA 85 57 0.2658 0.2471 0.3684 0.040 1j8b-a1-m1-cA_1j8b-a1-m2-cA
7 1j8b-a1-m1-cA 85 57 0.2658 0.2471 0.3684 0.040 1j8b-a1-m1-cA_1j8b-a1-m2-cA
8 4c89-a1-m1-cC 332 31 0.1392 0.0331 0.3548 3.7 4c89-a1-m1-cC_4c89-a1-m1-cA
9 4c89-a1-m1-cA 334 31 0.1392 0.0329 0.3548 3.7 4c89-a1-m1-cC_4c89-a1-m1-cA
10 6lon-a1-m1-cB 802 70 0.2911 0.0287 0.3286 6.1 6lon-a1-m1-cB_6lon-a1-m1-cD
11 6lon-a1-m1-cC 804 70 0.2911 0.0286 0.3286 6.3 6lon-a1-m1-cD_6lon-a1-m1-cC
12 6lon-a1-m1-cD 803 70 0.2911 0.0286 0.3286 6.4 6lon-a1-m1-cB_6lon-a1-m1-cD, 6lon-a1-m1-cD_6lon-a1-m1-cC
13 6ihe-a1-m2-cB 303 30 0.1646 0.0429 0.4333 6.9 6ihe-a1-m1-cA_6ihe-a1-m2-cB, 6ihe-a1-m1-cB_6ihe-a1-m2-cB, 6ihe-a1-m2-cA_6ihe-a1-m2-cB
14 6ihe-a1-m2-cA 303 30 0.1646 0.0429 0.4333 6.9 6ihe-a1-m2-cA_6ihe-a1-m2-cB
15 6ihe-a1-m1-cB 303 30 0.1646 0.0429 0.4333 6.9 6ihe-a1-m1-cB_6ihe-a1-m2-cB
16 6ihe-a1-m1-cA 303 30 0.1646 0.0429 0.4333 6.9 6ihe-a1-m1-cA_6ihe-a1-m2-cB
17 6p3n-a1-m2-cA 337 44 0.1899 0.0445 0.3409 9.3 6p3n-a1-m1-cA_6p3n-a1-m2-cA
18 6p3n-a1-m1-cA 337 44 0.1899 0.0445 0.3409 9.3 6p3n-a1-m1-cA_6p3n-a1-m2-cA
19 2f41-a2-m1-cD 108 25 0.1266 0.0926 0.4000 9.7 2f41-a2-m1-cC_2f41-a2-m1-cD
20 7uhz-a1-m1-cN 111 34 0.1266 0.0901 0.2941 9.9 7uhz-a1-m1-cL_7uhz-a1-m1-cN
21 7uhz-a1-m1-cL 111 34 0.1266 0.0901 0.2941 9.9 7uhz-a1-m1-cL_7uhz-a1-m1-cN

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Reference:
Jacob Schwartz et al.

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