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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=49)
GLLSQENTQIRDLQQENRELWISLEEHQDALELIMSKYRKQMLQLMVAK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6akk-a1-m2-cA 49 49 1.0000 1.0000 1.0000 3.06e-29 6akk-a1-m2-cB_6akk-a1-m2-cA
2 6akk-a1-m1-cA 49 49 1.0000 1.0000 1.0000 3.06e-29 6akk-a1-m2-cB_6akk-a1-m1-cA
3 6akl-a1-m1-cA 52 49 0.9796 0.9231 0.9796 1.20e-28 6akl-a1-m1-cB_6akl-a1-m1-cA
4 6akk-a1-m2-cB 48 48 0.9796 1.0000 1.0000 1.61e-28 6akk-a1-m1-cB_6akk-a1-m2-cB, 6akk-a1-m2-cB_6akk-a1-m1-cA, 6akk-a1-m2-cB_6akk-a1-m2-cA
5 6akk-a1-m1-cB 48 48 0.9796 1.0000 1.0000 1.61e-28 6akk-a1-m1-cB_6akk-a1-m2-cB
6 6akl-a1-m1-cB 47 47 0.9592 1.0000 1.0000 1.30e-27 6akl-a1-m1-cB_6akl-a1-m1-cA
7 6pw5-a1-m1-cC 734 41 0.2449 0.0163 0.2927 3.9 6pw5-a1-m1-cC_6pw5-a1-m1-cD
8 6pw5-a1-m1-cD 782 41 0.2449 0.0153 0.2927 4.3 6pw5-a1-m1-cC_6pw5-a1-m1-cD
9 8edv-a2-m1-cD 309 30 0.2041 0.0324 0.3333 8.9 8edv-a2-m1-cD_8edv-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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