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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=89)
GLSEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYR
IPADVDPLTITSSLSSDGVLTVDGPRKQV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2n0k-a1-m1-cB 89 89 1.0000 1.0000 1.0000 1.86e-60 2n0k-a1-m1-cA_2n0k-a1-m1-cB
2 2n0k-a1-m1-cA 89 89 1.0000 1.0000 1.0000 1.86e-60 2n0k-a1-m1-cA_2n0k-a1-m1-cB
3 3j07-a1-m1-cX 175 89 0.9888 0.5029 0.9888 4.39e-59 3j07-a1-m1-cG_3j07-a1-m1-cX, 3j07-a1-m1-cS_3j07-a1-m1-cX, 3j07-a1-m1-cW_3j07-a1-m1-cX
4 3j07-a1-m1-cW 175 89 0.9888 0.5029 0.9888 4.39e-59 3j07-a1-m1-cI_3j07-a1-m1-cW, 3j07-a1-m1-cW_3j07-a1-m1-cX
5 3j07-a1-m1-cS 175 89 0.9888 0.5029 0.9888 4.39e-59 3j07-a1-m1-cS_3j07-a1-m1-cX
6 3j07-a1-m1-cI 175 89 0.9888 0.5029 0.9888 4.39e-59 3j07-a1-m1-cI_3j07-a1-m1-cW
7 3j07-a1-m1-cG 175 89 0.9888 0.5029 0.9888 4.39e-59 3j07-a1-m1-cG_3j07-a1-m1-cX
8 2ygd-a1-m1-cX 175 89 0.9888 0.5029 0.9888 4.39e-59 2ygd-a1-m1-cU_2ygd-a1-m1-cX, 2ygd-a1-m1-cW_2ygd-a1-m1-cX
9 2ygd-a1-m1-cW 175 89 0.9888 0.5029 0.9888 4.39e-59 2ygd-a1-m1-cC_2ygd-a1-m1-cW, 2ygd-a1-m1-cW_2ygd-a1-m1-cX
10 2ygd-a1-m1-cV 175 89 0.9888 0.5029 0.9888 4.39e-59 2ygd-a1-m1-cF_2ygd-a1-m1-cV
11 2ygd-a1-m1-cU 175 89 0.9888 0.5029 0.9888 4.39e-59 2ygd-a1-m1-cF_2ygd-a1-m1-cU, 2ygd-a1-m1-cU_2ygd-a1-m1-cX
12 2ygd-a1-m1-cF 175 89 0.9888 0.5029 0.9888 4.39e-59 2ygd-a1-m1-cF_2ygd-a1-m1-cU, 2ygd-a1-m1-cF_2ygd-a1-m1-cV
13 2ygd-a1-m1-cC 175 89 0.9888 0.5029 0.9888 4.39e-59 2ygd-a1-m1-cC_2ygd-a1-m1-cW
14 6bp9-a1-m1-cB 89 89 0.9775 0.9775 0.9775 8.39e-59 6bp9-a1-m1-cA_6bp9-a1-m1-cB
15 6bp9-a1-m1-cA 89 89 0.9775 0.9775 0.9775 8.39e-59 6bp9-a1-m1-cA_6bp9-a1-m1-cB
16 3l1g-a1-m2-cA 95 85 0.9438 0.8842 0.9882 6.05e-57 3l1g-a1-m1-cA_3l1g-a1-m2-cA
17 3l1g-a1-m1-cA 95 85 0.9438 0.8842 0.9882 6.05e-57 3l1g-a1-m1-cA_3l1g-a1-m2-cA
18 4m5t-a3-m1-cG 86 85 0.9326 0.9651 0.9765 4.82e-56 4m5t-a3-m1-cC_4m5t-a3-m1-cG
19 2y1z-a1-m1-cA 85 85 0.9213 0.9647 0.9647 8.47e-56 2y1z-a1-m1-cA_2y1z-a1-m1-cB
20 2y1z-a1-m1-cB 87 87 0.9213 0.9425 0.9425 1.44e-55 2y1z-a1-m1-cA_2y1z-a1-m1-cB
21 4m5t-a3-m1-cE 85 84 0.9213 0.9647 0.9762 2.04e-55 4m5t-a3-m1-cC_4m5t-a3-m1-cE
22 4m5t-a3-m1-cC 85 85 0.9213 0.9647 0.9647 1.99e-53 4m5t-a3-m1-cA_4m5t-a3-m1-cC, 4m5t-a3-m1-cC_4m5t-a3-m1-cE, 4m5t-a3-m1-cC_4m5t-a3-m1-cG
23 4m5t-a3-m1-cA 82 85 0.8876 0.9634 0.9294 1.96e-50 4m5t-a3-m1-cA_4m5t-a3-m1-cC
24 2y1y-a1-m2-cA 77 78 0.8539 0.9870 0.9744 3.21e-49 2y1y-a1-m1-cA_2y1y-a1-m2-cA
25 2y1y-a1-m1-cA 77 78 0.8539 0.9870 0.9744 3.21e-49 2y1y-a1-m1-cA_2y1y-a1-m2-cA
26 3n3e-a1-m1-cA 106 86 0.5843 0.4906 0.6047 1.82e-36 3n3e-a1-m1-cB_3n3e-a1-m1-cA
27 3n3e-a1-m1-cB 104 85 0.5730 0.4904 0.6000 1.57e-35 3n3e-a1-m1-cB_3n3e-a1-m1-cA
28 6dv5-a1-m1-cK 175 83 0.5281 0.2686 0.5663 2.75e-29 6dv5-a1-m1-cJ_6dv5-a1-m1-cK
29 6dv5-a1-m1-cJ 162 79 0.5169 0.2840 0.5823 4.14e-29 6dv5-a1-m1-cJ_6dv5-a1-m1-cK
30 6dv5-a1-m1-cF 163 80 0.5169 0.2822 0.5750 8.72e-29 6dv5-a1-m1-cF_6dv5-a1-m1-cU
31 6dv5-a1-m1-cU 175 80 0.5169 0.2629 0.5750 9.07e-29 6dv5-a1-m1-cF_6dv5-a1-m1-cU
32 6dv5-a1-m1-cX 166 80 0.5169 0.2771 0.5750 9.74e-29 6dv5-a1-m1-cP_6dv5-a1-m1-cX
33 6dv5-a1-m1-cP 164 75 0.5056 0.2744 0.6000 3.52e-28 6dv5-a1-m1-cP_6dv5-a1-m1-cX
34 6f2r-a1-m1-cC 121 83 0.4382 0.3223 0.4699 2.69e-26 6f2r-a1-m1-cD_6f2r-a1-m1-cC
35 6f2r-a1-m1-cD 80 76 0.4045 0.4500 0.4737 2.04e-24 6f2r-a1-m1-cD_6f2r-a1-m1-cC
36 2bol-a1-m1-cB 290 88 0.2809 0.0862 0.2841 5.74e-04 2bol-a1-m1-cB_2bol-a1-m1-cA
37 2bol-a1-m1-cB 290 74 0.2135 0.0655 0.2568 0.19 2bol-a1-m1-cB_2bol-a1-m1-cA
38 2bol-a1-m1-cA 301 88 0.2809 0.0831 0.2841 0.016 2bol-a1-m1-cB_2bol-a1-m1-cA
39 2bol-a1-m1-cA 301 74 0.2135 0.0631 0.2568 0.058 2bol-a1-m1-cB_2bol-a1-m1-cA
40 3sgr-a3-m3-cF 25 20 0.1461 0.5200 0.6500 1.8 3sgr-a3-m1-cC_3sgr-a3-m3-cF, 3sgr-a3-m3-cB_3sgr-a3-m3-cF, 3sgr-a3-m3-cE_3sgr-a3-m3-cF
41 3sgr-a3-m3-cE 25 20 0.1461 0.5200 0.6500 1.8 3sgr-a3-m3-cB_3sgr-a3-m3-cE, 3sgr-a3-m3-cE_3sgr-a3-m3-cF
42 3sgr-a3-m3-cB 25 20 0.1461 0.5200 0.6500 1.8 3sgr-a3-m1-cD_3sgr-a3-m3-cB, 3sgr-a3-m3-cB_3sgr-a3-m3-cE, 3sgr-a3-m3-cB_3sgr-a3-m3-cF
43 3sgr-a3-m1-cD 25 20 0.1461 0.5200 0.6500 1.8 3sgr-a3-m1-cD_3sgr-a3-m3-cB
44 3sgr-a2-m1-cE 25 20 0.1461 0.5200 0.6500 1.8 3sgr-a2-m1-cA_3sgr-a2-m1-cE
45 3sgr-a2-m1-cB 25 20 0.1461 0.5200 0.6500 1.8 3sgr-a2-m1-cA_3sgr-a2-m1-cB
46 3sgr-a2-m1-cA 25 20 0.1461 0.5200 0.6500 1.8 3sgr-a2-m1-cA_3sgr-a2-m1-cB, 3sgr-a2-m1-cA_3sgr-a2-m1-cE
47 3sgr-a3-m1-cC 24 20 0.1461 0.5417 0.6500 1.9 3sgr-a3-m1-cC_3sgr-a3-m3-cF
48 3cu7-a3-m1-cA 1625 81 0.2921 0.0160 0.3210 5.0 3cu7-a3-m1-cB_3cu7-a3-m1-cA
49 3msu-a1-m1-cA 415 27 0.0899 0.0193 0.2963 5.5 3msu-a1-m1-cA_3msu-a1-m1-cB
50 3cu7-a3-m1-cB 1481 81 0.2921 0.0176 0.3210 5.9 3cu7-a3-m1-cB_3cu7-a3-m1-cA
51 3msu-a1-m1-cB 426 27 0.0899 0.0188 0.2963 6.1 3msu-a1-m1-cA_3msu-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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