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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
GLYSSLPPAKREEVEKLLNGSAGDTWRHLAGELGYQPEHIDSFTHEACPVRALLASWATQ
DSATLDALLAALRRIQRADLVESLCSESTATSPV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2n97-a1-m1-cB 94 94 1.0000 1.0000 1.0000 6.75e-65 2n97-a1-m1-cA_2n97-a1-m1-cB
2 2n97-a1-m1-cA 94 94 1.0000 1.0000 1.0000 6.75e-65 2n97-a1-m1-cA_2n97-a1-m1-cB
3 4f44-a1-m1-cB 83 86 0.8191 0.9277 0.8953 8.69e-43 4f44-a1-m1-cA_4f44-a1-m1-cB
4 4f44-a1-m1-cA 83 86 0.8191 0.9277 0.8953 8.69e-43 4f44-a1-m1-cA_4f44-a1-m1-cB
5 4o6x-a3-m1-cA 98 69 0.2553 0.2449 0.3478 3.88e-04 4o6x-a3-m2-cB_4o6x-a3-m1-cA
6 4o6x-a3-m2-cB 95 69 0.2553 0.2526 0.3478 4.33e-04 4o6x-a3-m2-cB_4o6x-a3-m1-cA
7 1umy-a1-m1-cD 381 46 0.1383 0.0341 0.2826 1.6 1umy-a1-m1-cC_1umy-a1-m1-cD
8 1umy-a1-m1-cC 380 46 0.1383 0.0342 0.2826 1.7 1umy-a1-m1-cC_1umy-a1-m1-cD
9 4m3p-a1-m1-cD 371 46 0.1383 0.0350 0.2826 1.7 4m3p-a1-m1-cD_4m3p-a1-m1-cB
10 8glv-a1-m1-cGt 4520 54 0.1915 0.0040 0.3333 1.9 8glv-a1-m1-cDb_8glv-a1-m1-cGt
11 8glv-a1-m1-cDb 4520 54 0.1915 0.0040 0.3333 1.9 8glv-a1-m1-cDb_8glv-a1-m1-cGt
12 1lt7-a2-m1-cA 305 46 0.1383 0.0426 0.2826 2.4 1lt7-a2-m1-cA_1lt7-a2-m1-cB
13 1lt7-a1-m1-cA 305 46 0.1383 0.0426 0.2826 2.4 1lt7-a1-m1-cA_1lt7-a1-m2-cB
14 1lt7-a2-m1-cB 315 46 0.1383 0.0413 0.2826 2.5 1lt7-a2-m1-cA_1lt7-a2-m1-cB
15 1lt7-a1-m2-cB 315 46 0.1383 0.0413 0.2826 2.5 1lt7-a1-m1-cA_1lt7-a1-m2-cB, 1lt7-a1-m1-cB_1lt7-a1-m2-cB
16 1lt7-a1-m1-cB 315 46 0.1383 0.0413 0.2826 2.5 1lt7-a1-m1-cB_1lt7-a1-m2-cB
17 4m3p-a1-m1-cB 373 46 0.1383 0.0349 0.2826 2.5 4m3p-a1-m1-cD_4m3p-a1-m1-cB
18 7pqa-a1-m1-cBBB 268 71 0.2128 0.0746 0.2817 3.7 7pqa-a1-m1-cBBB_7pqa-a1-m1-cAAA
19 7pqa-a1-m1-cAAA 275 51 0.1702 0.0582 0.3137 3.8 7pqa-a1-m1-cBBB_7pqa-a1-m1-cAAA
20 7y7s-a1-m1-cB 920 37 0.1064 0.0109 0.2703 4.8 7y7s-a1-m1-cB_7y7s-a1-m1-cA
21 7y7s-a1-m1-cA 937 37 0.1064 0.0107 0.2703 4.9 7y7s-a1-m1-cB_7y7s-a1-m1-cA
22 3zhd-a1-m3-cB 119 19 0.1064 0.0840 0.5263 5.5 3zhd-a1-m1-cA_3zhd-a1-m3-cB, 3zhd-a1-m2-cB_3zhd-a1-m3-cB, 3zhd-a1-m3-cA_3zhd-a1-m3-cB
23 3zhd-a1-m3-cA 119 19 0.1064 0.0840 0.5263 5.5 3zhd-a1-m3-cA_3zhd-a1-m3-cB
24 3zhd-a1-m2-cB 119 19 0.1064 0.0840 0.5263 5.5 3zhd-a1-m2-cB_3zhd-a1-m3-cB
25 3zhd-a1-m1-cA 119 19 0.1064 0.0840 0.5263 5.5 3zhd-a1-m1-cA_3zhd-a1-m3-cB

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Reference:
Jacob Schwartz et al.

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