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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
GMAIRRLVLDVLKPIRGTSIVDLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLN
FDDIRKMLEEEGCAIHSIDEVVSGNRIIEG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2x3d-a1-m2-cG 90 90 1.0000 1.0000 1.0000 3.84e-58 2x3d-a1-m1-cA_2x3d-a1-m2-cG
2 2x3d-a1-m2-cB 90 90 1.0000 1.0000 1.0000 3.84e-58 2x3d-a1-m2-cA_2x3d-a1-m2-cB
3 2x3d-a1-m2-cA 90 90 1.0000 1.0000 1.0000 3.84e-58 2x3d-a1-m2-cA_2x3d-a1-m2-cB
4 2x3d-a1-m1-cA 90 90 1.0000 1.0000 1.0000 3.84e-58 2x3d-a1-m1-cA_2x3d-a1-m2-cG
5 2raq-a1-m2-cG 91 84 0.4222 0.4176 0.4524 4.88e-17 2raq-a1-m1-cE_2raq-a1-m2-cG, 2raq-a1-m2-cF_2raq-a1-m2-cG
6 2raq-a1-m2-cF 91 84 0.4222 0.4176 0.4524 4.88e-17 2raq-a1-m2-cF_2raq-a1-m2-cG
7 2raq-a1-m1-cE 91 84 0.4222 0.4176 0.4524 4.88e-17 2raq-a1-m1-cE_2raq-a1-m2-cG
8 3bpd-a2-m1-cN 89 87 0.4333 0.4382 0.4483 6.16e-17 3bpd-a2-m1-cN_3bpd-a2-m1-cM
9 3bpd-a2-m1-cM 90 87 0.4333 0.4333 0.4483 6.82e-17 3bpd-a2-m1-cN_3bpd-a2-m1-cM
10 3hte-a1-m1-cA 317 74 0.2778 0.0789 0.3378 0.55 3hte-a1-m1-cB_3hte-a1-m1-cA, 3hte-a1-m1-cF_3hte-a1-m1-cA
11 6p8t-a2-m1-cF 463 25 0.1111 0.0216 0.4000 0.71 6p8t-a2-m1-cF_6p8t-a2-m1-cE
12 6p8t-a2-m1-cE 793 25 0.1111 0.0126 0.4000 1.2 6p8t-a2-m1-cF_6p8t-a2-m1-cE
13 5e01-a1-m1-cB 127 33 0.1000 0.0709 0.2727 7.2 5e01-a1-m1-cA_5e01-a1-m1-cB
14 5e01-a1-m1-cA 126 33 0.1000 0.0714 0.2727 7.6 5e01-a1-m1-cA_5e01-a1-m1-cB
15 3bdk-a1-m1-cA 349 66 0.2111 0.0544 0.2879 9.9 3bdk-a1-m1-cA_3bdk-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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