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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=62)
GMARDIQLPCDGDGVCMRCKSNPPPEESLTCGTCVTPWHVSCLSSPPKTLASTLQWHCPD
CS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7duf-a1-m1-cA 62 62 1.0000 1.0000 1.0000 1.19e-40 7duf-a1-m1-cB_7duf-a1-m1-cA
2 7duf-a1-m1-cB 57 57 0.9194 1.0000 1.0000 1.00e-36 7duf-a1-m1-cB_7duf-a1-m1-cA
3 3sox-a4-m3-cB 65 47 0.2419 0.2308 0.3191 7.55e-05 3sox-a4-m1-cB_3sox-a4-m3-cB
4 3sox-a4-m1-cB 65 47 0.2419 0.2308 0.3191 7.55e-05 3sox-a4-m1-cB_3sox-a4-m3-cB
5 2puy-a1-m1-cA 59 36 0.2258 0.2373 0.3889 0.062 2puy-a1-m1-cA_2puy-a1-m1-cB
6 2puy-a1-m1-cB 60 36 0.2258 0.2333 0.3889 0.071 2puy-a1-m1-cA_2puy-a1-m1-cB
7 7wzb-a1-m1-cA 251 11 0.1290 0.0319 0.7273 1.6 7wzb-a1-m1-cA_7wzb-a1-m1-cB
8 7wzb-a1-m1-cB 254 11 0.1290 0.0315 0.7273 1.6 7wzb-a1-m1-cA_7wzb-a1-m1-cB
9 4zlh-a1-m1-cA 323 11 0.1290 0.0248 0.7273 1.7 4zlh-a1-m1-cA_4zlh-a1-m1-cB
10 4zlh-a1-m1-cB 338 11 0.1290 0.0237 0.7273 1.7 4zlh-a1-m1-cA_4zlh-a1-m1-cB
11 3kv5-a3-m2-cD 445 34 0.1452 0.0202 0.2647 7.2 3kv5-a3-m2-cD_3kv5-a3-m1-cA
12 3kv5-a3-m1-cA 447 34 0.1452 0.0201 0.2647 7.3 3kv5-a3-m2-cD_3kv5-a3-m1-cA
13 7x7w-a1-m2-cB 288 26 0.1129 0.0243 0.2692 9.0 7x7w-a1-m1-cA_7x7w-a1-m2-cB
14 7x7w-a1-m1-cA 288 26 0.1129 0.0243 0.2692 9.0 7x7w-a1-m1-cA_7x7w-a1-m2-cB

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Reference:
Jacob Schwartz et al.

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