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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=63)
GMARVEYSYEKLNDTHYKLKLKVTYEYRKSPEARRLAEDLVQAFVDALSSLPFITVEYEV
EEV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8d04-a1-m1-cB 63 63 1.0000 1.0000 1.0000 1.13e-40 8d04-a1-m1-cB_8d04-a1-m1-cA
2 8d04-a1-m1-cA 66 63 1.0000 0.9545 1.0000 1.24e-40 8d04-a1-m1-cB_8d04-a1-m1-cA
3 7vw2-a1-m1-cB 85 18 0.1429 0.1059 0.5000 1.0 7vw2-a1-m1-cA_7vw2-a1-m1-cB
4 7vw2-a1-m1-cA 85 18 0.1429 0.1059 0.5000 1.0 7vw2-a1-m1-cA_7vw2-a1-m1-cB
5 3lr2-a1-m1-cB 129 22 0.1429 0.0698 0.4091 5.9 3lr2-a1-m1-cA_3lr2-a1-m1-cB
6 3lr2-a1-m1-cA 125 22 0.1429 0.0720 0.4091 6.1 3lr2-a1-m1-cA_3lr2-a1-m1-cB
7 8d27-a1-m1-cB 281 25 0.1429 0.0320 0.3600 7.4 8d27-a1-m1-cA_8d27-a1-m1-cB
8 8d27-a1-m1-cA 281 25 0.1429 0.0320 0.3600 7.4 8d27-a1-m1-cA_8d27-a1-m1-cB
9 6gwu-a1-m1-cD 202 45 0.2540 0.0792 0.3556 7.7 6gwu-a1-m1-cD_6gwu-a1-m1-cA, 6gwu-a1-m1-cD_6gwu-a1-m1-cB, 6gwu-a1-m1-cD_6gwu-a1-m1-cC
10 6gwu-a1-m1-cC 204 45 0.2540 0.0784 0.3556 7.7 6gwu-a1-m1-cD_6gwu-a1-m1-cC
11 6gwu-a1-m1-cB 205 45 0.2540 0.0780 0.3556 7.7 6gwu-a1-m1-cD_6gwu-a1-m1-cB
12 6gwu-a1-m1-cA 208 45 0.2540 0.0769 0.3556 7.7 6gwu-a1-m1-cD_6gwu-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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