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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=92)
GMASLKEIIDELGKQAKEQNKIASRIMKIKGIKRIVVQLNAVPQDGKIRYSMTIHSQNNF
RKQIGITPQDAEDLKLIAEFLEKYSDFLNEYV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2x5h-a1-m1-cA 92 92 1.0000 1.0000 1.0000 1.79e-63 2x5h-a1-m1-cA_2x5h-a1-m1-cD
2 2x5h-a1-m1-cD 94 91 0.9891 0.9681 1.0000 1.54e-62 2x5h-a1-m1-cA_2x5h-a1-m1-cD
3 2x5g-a1-m2-cA 90 90 0.9239 0.9444 0.9444 1.70e-53 2x5g-a1-m1-cA_2x5g-a1-m2-cA
4 2x5g-a1-m1-cA 90 90 0.9239 0.9444 0.9444 1.70e-53 2x5g-a1-m1-cA_2x5g-a1-m2-cA
5 3ct4-a4-m6-cA 318 37 0.1630 0.0472 0.4054 0.94 3ct4-a4-m3-cC_3ct4-a4-m6-cA
6 3ct4-a4-m3-cC 318 37 0.1630 0.0472 0.4054 0.94 3ct4-a4-m3-cB_3ct4-a4-m3-cC, 3ct4-a4-m3-cC_3ct4-a4-m6-cA
7 3ct4-a4-m3-cB 318 37 0.1630 0.0472 0.4054 0.94 3ct4-a4-m3-cB_3ct4-a4-m3-cC
8 3ct4-a3-m4-cC 318 37 0.1630 0.0472 0.4054 0.94 3ct4-a3-m1-cC_3ct4-a3-m4-cC
9 3ct4-a3-m1-cC 318 37 0.1630 0.0472 0.4054 0.94 3ct4-a3-m1-cC_3ct4-a3-m4-cC
10 7m92-a1-m1-cB 358 38 0.1522 0.0391 0.3684 1.5 7m92-a1-m1-cA_7m92-a1-m1-cB
11 7m92-a1-m1-cA 358 38 0.1522 0.0391 0.3684 1.5 7m92-a1-m1-cA_7m92-a1-m1-cB
12 6vfw-a2-m1-cB 423 39 0.1413 0.0307 0.3333 2.2 6vfw-a2-m1-cB_6vfw-a2-m1-cD
13 6vfw-a2-m1-cD 423 39 0.1413 0.0307 0.3333 2.3 6vfw-a2-m1-cB_6vfw-a2-m1-cD
14 1vp4-a1-m1-cB 408 53 0.1848 0.0417 0.3208 2.7 1vp4-a1-m1-cB_1vp4-a1-m1-cA
15 7fd9-a1-m1-cB 767 50 0.1196 0.0143 0.2200 2.7 7fd9-a1-m1-cA_7fd9-a1-m1-cB
16 7fd9-a1-m1-cA 767 50 0.1196 0.0143 0.2200 2.7 7fd9-a1-m1-cA_7fd9-a1-m1-cB
17 1qo8-a1-m1-cD 564 32 0.1630 0.0266 0.4688 2.9 1qo8-a1-m1-cA_1qo8-a1-m1-cD
18 1qo8-a1-m1-cA 564 32 0.1630 0.0266 0.4688 2.9 1qo8-a1-m1-cA_1qo8-a1-m1-cD
19 6n4x-a1-m1-cA 506 50 0.1196 0.0217 0.2200 3.0 6n4x-a1-m1-cB_6n4x-a1-m1-cA
20 1vp4-a1-m1-cA 412 53 0.1848 0.0413 0.3208 3.0 1vp4-a1-m1-cB_1vp4-a1-m1-cA
21 6n4x-a1-m1-cB 487 50 0.1196 0.0226 0.2200 3.1 6n4x-a1-m1-cB_6n4x-a1-m1-cA
22 3lmk-a1-m1-cB 439 50 0.1196 0.0251 0.2200 3.2 3lmk-a1-m1-cA_3lmk-a1-m1-cB
23 3lmk-a1-m1-cA 438 50 0.1196 0.0251 0.2200 3.3 3lmk-a1-m1-cA_3lmk-a1-m1-cB
24 1r9d-a1-m1-cB 786 33 0.1413 0.0165 0.3939 4.3 1r9d-a1-m1-cA_1r9d-a1-m1-cB
25 1r9d-a1-m1-cA 786 33 0.1413 0.0165 0.3939 4.3 1r9d-a1-m1-cA_1r9d-a1-m1-cB
26 8dk1-a1-m1-cG 176 30 0.1196 0.0625 0.3667 6.3 8dk1-a1-m1-cG_8dk1-a1-m1-cH
27 8dk1-a1-m1-cH 189 30 0.1196 0.0582 0.3667 6.6 8dk1-a1-m1-cG_8dk1-a1-m1-cH
28 6ynz-a1-m1-ci4 68 37 0.1304 0.1765 0.3243 6.8 6ynz-a1-m1-ci5_6ynz-a1-m1-ci4
29 7o0h-a1-m1-cA 566 16 0.1087 0.0177 0.6250 8.5 7o0h-a1-m1-cB_7o0h-a1-m1-cA
30 7o0h-a1-m1-cB 523 16 0.1087 0.0191 0.6250 8.6 7o0h-a1-m1-cB_7o0h-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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