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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=10)
GMLASQQNQS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6n3a-a1-m1-cT 10 10 1.0000 1.0000 1.0000 2.3 6n3a-a1-m1-cO_6n3a-a1-m1-cT
2 6n3a-a1-m1-cO 10 10 1.0000 1.0000 1.0000 2.3 6n3a-a1-m1-cO_6n3a-a1-m1-cT
3 6n37-a1-m1-cJ 36 10 1.0000 0.2778 1.0000 2.7 6n37-a1-m1-cF_6n37-a1-m1-cJ, 6n37-a1-m1-cH_6n37-a1-m1-cJ
4 6n37-a1-m1-cH 36 10 1.0000 0.2778 1.0000 2.7 6n37-a1-m1-cH_6n37-a1-m1-cJ
5 6n37-a1-m1-cF 36 10 1.0000 0.2778 1.0000 2.7 6n37-a1-m1-cF_6n37-a1-m1-cJ
6 6n3b-a1-m1-cJ 41 10 1.0000 0.2439 1.0000 3.0 6n3b-a1-m1-cB_6n3b-a1-m1-cJ
7 6n3b-a1-m1-cB 41 10 1.0000 0.2439 1.0000 3.0 6n3b-a1-m1-cB_6n3b-a1-m1-cJ
8 6n3a-a1-m1-cJ 50 10 1.0000 0.2000 1.0000 4.6 6n3a-a1-m1-cE_6n3a-a1-m1-cJ, 6n3a-a1-m1-cI_6n3a-a1-m1-cJ
9 6n3a-a1-m1-cI 50 10 1.0000 0.2000 1.0000 4.6 6n3a-a1-m1-cI_6n3a-a1-m1-cJ
10 6n3a-a1-m1-cE 50 10 1.0000 0.2000 1.0000 4.6 6n3a-a1-m1-cE_6n3a-a1-m1-cJ
11 7kwz-a1-m1-cE 139 10 1.0000 0.0719 1.0000 4.6 7kwz-a1-m1-cD_7kwz-a1-m1-cE
12 7kwz-a1-m1-cD 139 10 1.0000 0.0719 1.0000 4.6 7kwz-a1-m1-cD_7kwz-a1-m1-cE
13 7q3u-a1-m1-cC 71 10 1.0000 0.1408 1.0000 4.8 7q3u-a1-m1-cA_7q3u-a1-m1-cC
14 7q3u-a1-m1-cA 71 10 1.0000 0.1408 1.0000 4.8 7q3u-a1-m1-cA_7q3u-a1-m1-cC
15 7py2-a1-m1-cD 79 10 1.0000 0.1266 1.0000 5.9 7py2-a1-m1-cC_7py2-a1-m1-cD
16 7py2-a1-m1-cC 79 10 1.0000 0.1266 1.0000 5.9 7py2-a1-m1-cC_7py2-a1-m1-cD
17 6n3b-a1-m1-cI 36 9 0.9000 0.2500 1.0000 9.0 6n3b-a1-m1-cA_6n3b-a1-m1-cI
18 6n3b-a1-m1-cA 36 9 0.9000 0.2500 1.0000 9.0 6n3b-a1-m1-cA_6n3b-a1-m1-cI

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Reference:
Jacob Schwartz et al.

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