Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=91)
GMNKTQLIDVIAEKAELSKTQAKAALESTLAAITESLKEGDAVQLVGFGTFKVNHRAERT
GRNPQTGKEIKIAAANVPAFVSGKALKDAVK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6o8q-a1-m1-cH 91 91 1.0000 1.0000 1.0000 4.46e-61 6o8q-a1-m1-cG_6o8q-a1-m1-cH
2 6o8q-a1-m1-cG 91 91 1.0000 1.0000 1.0000 4.46e-61 6o8q-a1-m1-cG_6o8q-a1-m1-cH
3 1hue-a1-m1-cB 90 90 0.5824 0.5889 0.5889 2.18e-33 1hue-a1-m1-cA_1hue-a1-m1-cB
4 1hue-a1-m1-cA 90 90 0.5824 0.5889 0.5889 2.18e-33 1hue-a1-m1-cA_1hue-a1-m1-cB
5 4qjn-a2-m1-cD 90 90 0.5824 0.5889 0.5889 3.62e-33 4qjn-a2-m1-cB_4qjn-a2-m1-cD
6 4qjn-a2-m1-cB 90 90 0.5824 0.5889 0.5889 3.62e-33 4qjn-a2-m1-cB_4qjn-a2-m1-cD
7 3rhi-a2-m1-cC 90 90 0.5495 0.5556 0.5556 8.49e-32 3rhi-a2-m1-cD_3rhi-a2-m1-cC
8 5lvt-a2-m1-cD 91 89 0.5385 0.5385 0.5506 9.81e-26 5lvt-a2-m1-cB_5lvt-a2-m1-cD
9 5lvt-a2-m1-cB 91 89 0.5385 0.5385 0.5506 9.81e-26 5lvt-a2-m1-cB_5lvt-a2-m1-cD
10 1p71-a1-m1-cB 93 89 0.4615 0.4516 0.4719 1.55e-24 1p71-a1-m1-cB_1p71-a1-m1-cA
11 1p71-a1-m1-cA 94 89 0.4615 0.4468 0.4719 1.75e-24 1p71-a1-m1-cB_1p71-a1-m1-cA
12 3rhi-a2-m1-cD 82 90 0.4725 0.5244 0.4778 3.74e-22 3rhi-a2-m1-cD_3rhi-a2-m1-cC
13 4p3v-a1-m2-cA 72 89 0.5055 0.6389 0.5169 1.30e-21 4p3v-a1-m1-cA_4p3v-a1-m2-cA
14 4p3v-a1-m1-cA 72 89 0.5055 0.6389 0.5169 1.30e-21 4p3v-a1-m1-cA_4p3v-a1-m2-cA
15 5fbm-a1-m1-cA 83 89 0.4835 0.5301 0.4944 6.45e-21 5fbm-a1-m1-cA_5fbm-a1-m1-cB
16 1huu-a4-m3-cB 74 90 0.4725 0.5811 0.4778 1.33e-20 1huu-a4-m1-cB_1huu-a4-m3-cB
17 1huu-a4-m1-cB 74 90 0.4725 0.5811 0.4778 1.33e-20 1huu-a4-m1-cB_1huu-a4-m3-cB
18 5fbm-a1-m1-cB 83 89 0.4725 0.5181 0.4831 2.45e-20 5fbm-a1-m1-cA_5fbm-a1-m1-cB
19 6n2l-a1-m2-cA 88 89 0.4505 0.4659 0.4607 5.84e-18 6n2l-a1-m1-cA_6n2l-a1-m2-cA
20 6n2l-a1-m1-cA 88 89 0.4505 0.4659 0.4607 5.84e-18 6n2l-a1-m1-cA_6n2l-a1-m2-cA
21 4dky-a1-m2-cA 97 89 0.4066 0.3814 0.4157 5.21e-16 4dky-a1-m1-cA_4dky-a1-m2-cA
22 4dky-a1-m1-cA 97 89 0.4066 0.3814 0.4157 5.21e-16 4dky-a1-m1-cA_4dky-a1-m2-cA
23 5eka-a1-m2-cA 85 90 0.4176 0.4471 0.4222 5.10e-15 5eka-a1-m1-cA_5eka-a1-m2-cA
24 5eka-a1-m1-cA 85 90 0.4176 0.4471 0.4222 5.10e-15 5eka-a1-m1-cA_5eka-a1-m2-cA
25 5l8z-a1-m2-cA 95 88 0.4286 0.4105 0.4432 1.11e-13 5l8z-a1-m1-cA_5l8z-a1-m2-cA
26 5l8z-a1-m1-cA 95 88 0.4286 0.4105 0.4432 1.11e-13 5l8z-a1-m1-cA_5l8z-a1-m2-cA
27 1wtu-a1-m1-cB 99 88 0.3846 0.3535 0.3977 7.92e-12 1wtu-a1-m1-cA_1wtu-a1-m1-cB
28 1wtu-a1-m1-cA 99 88 0.3846 0.3535 0.3977 7.92e-12 1wtu-a1-m1-cA_1wtu-a1-m1-cB
29 1exe-a1-m1-cB 99 88 0.3846 0.3535 0.3977 1.50e-11 1exe-a1-m1-cA_1exe-a1-m1-cB
30 1exe-a1-m1-cA 99 88 0.3846 0.3535 0.3977 1.50e-11 1exe-a1-m1-cA_1exe-a1-m1-cB
31 1b8z-a1-m1-cB 67 90 0.3956 0.5373 0.4000 6.24e-10 1b8z-a1-m1-cA_1b8z-a1-m1-cB
32 1b8z-a1-m1-cA 67 90 0.3956 0.5373 0.4000 6.24e-10 1b8z-a1-m1-cA_1b8z-a1-m1-cB
33 2np2-a1-m1-cB 102 93 0.3077 0.2745 0.3011 5.45e-09 2np2-a1-m1-cA_2np2-a1-m1-cB
34 2np2-a1-m1-cA 102 93 0.3077 0.2745 0.3011 5.45e-09 2np2-a1-m1-cA_2np2-a1-m1-cB
35 2ndp-a1-m1-cB 99 48 0.2088 0.1919 0.3958 0.003 2ndp-a1-m1-cA_2ndp-a1-m1-cB
36 2ndp-a1-m1-cA 99 48 0.2088 0.1919 0.3958 0.003 2ndp-a1-m1-cA_2ndp-a1-m1-cB
37 6lmj-a1-m1-cA 99 89 0.2747 0.2525 0.2809 0.068 6lmj-a1-m1-cB_6lmj-a1-m1-cA
38 6lmj-a1-m1-cB 98 89 0.2747 0.2551 0.2809 0.076 6lmj-a1-m1-cB_6lmj-a1-m1-cA
39 3pfi-a2-m3-cB 277 42 0.1868 0.0614 0.4048 5.3 3pfi-a2-m3-cB_3pfi-a2-m3-cA
40 3pfi-a2-m3-cA 295 44 0.1868 0.0576 0.3864 5.7 3pfi-a2-m3-cB_3pfi-a2-m3-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600