Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
GMQIFVDTVQWKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLDFAGKQLEDGRTLSDY
NIQKESALILLLTLR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6ob1-a1-m1-cB 75 75 1.0000 1.0000 1.0000 3.67e-50 6ob1-a1-m1-cA_6ob1-a1-m1-cB
2 6ob1-a1-m1-cA 75 75 0.9867 0.9867 0.9867 7.35e-49 6ob1-a1-m1-cA_6ob1-a1-m1-cB
3 6nxl-a3-m1-cD 74 74 0.9733 0.9865 0.9865 6.43e-48 6nxl-a3-m1-cC_6nxl-a3-m1-cD
4 6nxl-a3-m1-cC 73 73 0.9600 0.9863 0.9863 4.77e-47 6nxl-a3-m1-cC_6nxl-a3-m1-cD
5 6dj9-a3-m1-cI 78 77 0.8533 0.8205 0.8312 2.63e-37 6dj9-a3-m1-cJ_6dj9-a3-m1-cI
6 6dj9-a3-m1-cJ 77 76 0.8400 0.8182 0.8289 2.27e-36 6dj9-a3-m1-cJ_6dj9-a3-m1-cI
7 6njg-a1-m2-cC 76 74 0.7600 0.7500 0.7703 9.31e-36 6njg-a1-m1-cC_6njg-a1-m2-cC
8 6njg-a1-m1-cC 76 74 0.7600 0.7500 0.7703 9.31e-36 6njg-a1-m1-cC_6njg-a1-m2-cC
9 7rma-a1-m2-cA 75 75 0.8000 0.8000 0.8000 1.08e-35 7rma-a1-m1-cA_7rma-a1-m2-cA
10 7rma-a1-m1-cA 75 75 0.8000 0.8000 0.8000 1.08e-35 7rma-a1-m1-cA_7rma-a1-m2-cA
11 5o6t-a2-m1-cC 75 75 0.7467 0.7467 0.7467 1.53e-35 5o6t-a2-m1-cD_5o6t-a2-m1-cC
12 5o6s-a2-m1-cC 75 75 0.7467 0.7467 0.7467 1.53e-35 5o6s-a2-m1-cC_5o6s-a2-m1-cD
13 5o6t-a2-m1-cD 74 72 0.7467 0.7568 0.7778 2.05e-35 5o6t-a2-m1-cD_5o6t-a2-m1-cC
14 5o6s-a2-m1-cD 75 72 0.7467 0.7467 0.7778 2.90e-35 5o6s-a2-m1-cC_5o6s-a2-m1-cD
15 8cx9-a4-m1-cJ 74 74 0.7867 0.7973 0.7973 9.43e-35 8cx9-a4-m1-cH_8cx9-a4-m1-cJ
16 8cx9-a4-m1-cH 74 74 0.7867 0.7973 0.7973 9.43e-35 8cx9-a4-m1-cH_8cx9-a4-m1-cJ
17 5tog-a2-m2-cA 75 67 0.7467 0.7467 0.8358 1.38e-32 5tog-a2-m1-cA_5tog-a2-m2-cA
18 5tog-a2-m1-cA 75 67 0.7467 0.7467 0.8358 1.38e-32 5tog-a2-m1-cA_5tog-a2-m2-cA
19 1ndd-a5-m1-cB 76 74 0.4667 0.4605 0.4730 1.20e-19 1ndd-a5-m1-cD_1ndd-a5-m1-cB
20 1ndd-a5-m1-cA 74 74 0.4667 0.4730 0.4730 1.23e-19 1ndd-a5-m1-cD_1ndd-a5-m1-cA
21 1ndd-a5-m1-cD 73 73 0.4533 0.4658 0.4658 1.05e-18 1ndd-a5-m1-cC_1ndd-a5-m1-cD, 1ndd-a5-m1-cD_1ndd-a5-m1-cA, 1ndd-a5-m1-cD_1ndd-a5-m1-cB
22 1ndd-a5-m1-cC 73 73 0.4533 0.4658 0.4658 1.05e-18 1ndd-a5-m1-cC_1ndd-a5-m1-cD
23 2wyq-a1-m2-cA 77 76 0.3067 0.2987 0.3026 4.59e-07 2wyq-a1-m1-cA_2wyq-a1-m2-cA
24 2wyq-a1-m1-cA 77 76 0.3067 0.2987 0.3026 4.59e-07 2wyq-a1-m1-cA_2wyq-a1-m2-cA
25 7mrj-a1-m1-cA 85 58 0.2000 0.1765 0.2586 0.016 7mrj-a1-m1-cB_7mrj-a1-m1-cA
26 7mrj-a1-m1-cB 75 58 0.2000 0.2000 0.2586 0.020 7mrj-a1-m1-cB_7mrj-a1-m1-cA
27 3qa8-a2-m1-cH 541 58 0.2133 0.0296 0.2759 0.96 3qa8-a2-m1-cH_3qa8-a2-m1-cE
28 3qa8-a2-m1-cF 622 58 0.2133 0.0257 0.2759 1.1 3qa8-a2-m1-cE_3qa8-a2-m1-cF
29 3qa8-a2-m1-cE 622 58 0.2133 0.0257 0.2759 1.1 3qa8-a2-m1-cE_3qa8-a2-m1-cF, 3qa8-a2-m1-cH_3qa8-a2-m1-cE
30 3mkq-a1-m1-cE 810 37 0.1467 0.0136 0.2973 1.4 3mkq-a1-m1-cE_3mkq-a1-m1-cC
31 3mkq-a1-m1-cC 811 37 0.1467 0.0136 0.2973 1.4 3mkq-a1-m1-cE_3mkq-a1-m1-cC
32 3ics-a1-m1-cB 538 33 0.1867 0.0260 0.4242 5.0 3ics-a1-m1-cB_3ics-a1-m1-cA
33 3ics-a1-m1-cA 539 33 0.1867 0.0260 0.4242 5.1 3ics-a1-m1-cB_3ics-a1-m1-cA
34 2rdl-a1-m2-cB 226 28 0.1333 0.0442 0.3571 6.1 2rdl-a1-m2-cB_2rdl-a1-m1-cA
35 2rdl-a1-m1-cA 226 28 0.1333 0.0442 0.3571 6.1 2rdl-a1-m2-cB_2rdl-a1-m1-cA
36 6h56-a1-m1-cA 181 20 0.1200 0.0497 0.4500 6.6 6h56-a1-m1-cB_6h56-a1-m1-cA
37 6h56-a1-m1-cB 179 20 0.1200 0.0503 0.4500 6.8 6h56-a1-m1-cB_6h56-a1-m1-cA
38 4kik-a1-m1-cA 618 35 0.1867 0.0227 0.4000 7.7 4kik-a1-m1-cA_4kik-a1-m1-cB
39 4kik-a1-m1-cB 648 35 0.1867 0.0216 0.4000 8.2 4kik-a1-m1-cA_4kik-a1-m1-cB
40 7kb1-a1-m1-cD 428 40 0.1733 0.0304 0.3250 8.9 7kb1-a1-m1-cA_7kb1-a1-m1-cD, 7kb1-a1-m1-cB_7kb1-a1-m1-cD, 7kb1-a1-m1-cC_7kb1-a1-m1-cD
41 7kb1-a1-m1-cC 428 40 0.1733 0.0304 0.3250 8.9 7kb1-a1-m1-cC_7kb1-a1-m1-cD
42 7kb1-a1-m1-cB 428 40 0.1733 0.0304 0.3250 8.9 7kb1-a1-m1-cB_7kb1-a1-m1-cD
43 7kb1-a1-m1-cA 428 40 0.1733 0.0304 0.3250 8.9 7kb1-a1-m1-cA_7kb1-a1-m1-cD
44 4e3c-a3-m1-cE 624 35 0.1867 0.0224 0.4000 9.4 4e3c-a3-m1-cD_4e3c-a3-m1-cE
45 4e3c-a3-m1-cD 624 35 0.1867 0.0224 0.4000 9.4 4e3c-a3-m1-cD_4e3c-a3-m1-cE
46 2xwx-a1-m1-cB 385 36 0.1867 0.0364 0.3889 9.6 2xwx-a1-m1-cA_2xwx-a1-m1-cB
47 2xwx-a1-m1-cA 385 36 0.1867 0.0364 0.3889 9.6 2xwx-a1-m1-cA_2xwx-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600