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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=85)
GMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISRCFHRKYRIPA
DVDPLTITSSLSSDGVLTVNGPRKQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4m5t-a3-m1-cG 86 85 1.0000 0.9884 1.0000 7.31e-59 4m5t-a3-m1-cC_4m5t-a3-m1-cG
2 4m5t-a3-m1-cE 85 85 1.0000 1.0000 1.0000 8.36e-59 4m5t-a3-m1-cC_4m5t-a3-m1-cE
3 4m5t-a3-m1-cC 85 85 0.9882 0.9882 0.9882 2.88e-56 4m5t-a3-m1-cA_4m5t-a3-m1-cC, 4m5t-a3-m1-cC_4m5t-a3-m1-cE, 4m5t-a3-m1-cC_4m5t-a3-m1-cG
4 3l1g-a1-m2-cA 95 84 0.9765 0.8737 0.9881 4.60e-56 3l1g-a1-m1-cA_3l1g-a1-m2-cA
5 3l1g-a1-m1-cA 95 84 0.9765 0.8737 0.9881 4.60e-56 3l1g-a1-m1-cA_3l1g-a1-m2-cA
6 2n0k-a1-m1-cB 89 84 0.9647 0.9213 0.9762 1.95e-55 2n0k-a1-m1-cA_2n0k-a1-m1-cB
7 2n0k-a1-m1-cA 89 84 0.9647 0.9213 0.9762 1.95e-55 2n0k-a1-m1-cA_2n0k-a1-m1-cB
8 3j07-a1-m1-cX 175 84 0.9765 0.4743 0.9881 2.91e-55 3j07-a1-m1-cG_3j07-a1-m1-cX, 3j07-a1-m1-cS_3j07-a1-m1-cX, 3j07-a1-m1-cW_3j07-a1-m1-cX
9 3j07-a1-m1-cW 175 84 0.9765 0.4743 0.9881 2.91e-55 3j07-a1-m1-cI_3j07-a1-m1-cW, 3j07-a1-m1-cW_3j07-a1-m1-cX
10 3j07-a1-m1-cS 175 84 0.9765 0.4743 0.9881 2.91e-55 3j07-a1-m1-cS_3j07-a1-m1-cX
11 3j07-a1-m1-cI 175 84 0.9765 0.4743 0.9881 2.91e-55 3j07-a1-m1-cI_3j07-a1-m1-cW
12 3j07-a1-m1-cG 175 84 0.9765 0.4743 0.9881 2.91e-55 3j07-a1-m1-cG_3j07-a1-m1-cX
13 2ygd-a1-m1-cX 175 84 0.9765 0.4743 0.9881 2.91e-55 2ygd-a1-m1-cU_2ygd-a1-m1-cX, 2ygd-a1-m1-cW_2ygd-a1-m1-cX
14 2ygd-a1-m1-cW 175 84 0.9765 0.4743 0.9881 2.91e-55 2ygd-a1-m1-cC_2ygd-a1-m1-cW, 2ygd-a1-m1-cW_2ygd-a1-m1-cX
15 2ygd-a1-m1-cV 175 84 0.9765 0.4743 0.9881 2.91e-55 2ygd-a1-m1-cF_2ygd-a1-m1-cV
16 2ygd-a1-m1-cU 175 84 0.9765 0.4743 0.9881 2.91e-55 2ygd-a1-m1-cF_2ygd-a1-m1-cU, 2ygd-a1-m1-cU_2ygd-a1-m1-cX
17 2ygd-a1-m1-cF 175 84 0.9765 0.4743 0.9881 2.91e-55 2ygd-a1-m1-cF_2ygd-a1-m1-cU, 2ygd-a1-m1-cF_2ygd-a1-m1-cV
18 2ygd-a1-m1-cC 175 84 0.9765 0.4743 0.9881 2.91e-55 2ygd-a1-m1-cC_2ygd-a1-m1-cW
19 6bp9-a1-m1-cB 89 84 0.9647 0.9213 0.9762 4.11e-55 6bp9-a1-m1-cA_6bp9-a1-m1-cB
20 6bp9-a1-m1-cA 89 84 0.9647 0.9213 0.9762 4.11e-55 6bp9-a1-m1-cA_6bp9-a1-m1-cB
21 2y1z-a1-m1-cA 85 84 0.9529 0.9529 0.9643 7.04e-55 2y1z-a1-m1-cA_2y1z-a1-m1-cB
22 2y1z-a1-m1-cB 87 83 0.9412 0.9195 0.9639 5.05e-54 2y1z-a1-m1-cA_2y1z-a1-m1-cB
23 4m5t-a3-m1-cA 82 85 0.9529 0.9878 0.9529 3.43e-53 4m5t-a3-m1-cA_4m5t-a3-m1-cC
24 2y1y-a1-m2-cA 77 78 0.8941 0.9870 0.9744 6.12e-49 2y1y-a1-m1-cA_2y1y-a1-m2-cA
25 2y1y-a1-m1-cA 77 78 0.8941 0.9870 0.9744 6.12e-49 2y1y-a1-m1-cA_2y1y-a1-m2-cA
26 3n3e-a1-m1-cA 106 82 0.5647 0.4528 0.5854 9.83e-33 3n3e-a1-m1-cB_3n3e-a1-m1-cA
27 3n3e-a1-m1-cB 104 82 0.5647 0.4615 0.5854 1.00e-32 3n3e-a1-m1-cB_3n3e-a1-m1-cA
28 6dv5-a1-m1-cK 175 83 0.5647 0.2743 0.5783 4.89e-31 6dv5-a1-m1-cJ_6dv5-a1-m1-cK
29 6dv5-a1-m1-cJ 162 79 0.5529 0.2901 0.5949 5.89e-31 6dv5-a1-m1-cJ_6dv5-a1-m1-cK
30 6dv5-a1-m1-cF 163 80 0.5529 0.2883 0.5875 1.34e-30 6dv5-a1-m1-cF_6dv5-a1-m1-cU
31 6dv5-a1-m1-cU 175 80 0.5529 0.2686 0.5875 1.36e-30 6dv5-a1-m1-cF_6dv5-a1-m1-cU
32 6dv5-a1-m1-cX 166 80 0.5529 0.2831 0.5875 1.45e-30 6dv5-a1-m1-cP_6dv5-a1-m1-cX
33 6dv5-a1-m1-cP 164 75 0.5412 0.2805 0.6133 4.92e-30 6dv5-a1-m1-cP_6dv5-a1-m1-cX
34 6f2r-a1-m1-cC 121 82 0.4353 0.3058 0.4512 5.29e-24 6f2r-a1-m1-cD_6f2r-a1-m1-cC
35 6f2r-a1-m1-cD 80 76 0.4118 0.4375 0.4605 7.82e-23 6f2r-a1-m1-cD_6f2r-a1-m1-cC
36 2bol-a1-m1-cB 290 66 0.2235 0.0655 0.2879 0.013 2bol-a1-m1-cB_2bol-a1-m1-cA
37 2bol-a1-m1-cB 290 74 0.2235 0.0655 0.2568 0.19 2bol-a1-m1-cB_2bol-a1-m1-cA
38 2bol-a1-m1-cA 301 74 0.2235 0.0631 0.2568 0.10 2bol-a1-m1-cB_2bol-a1-m1-cA
39 2bol-a1-m1-cA 301 66 0.2235 0.0631 0.2879 0.12 2bol-a1-m1-cB_2bol-a1-m1-cA
40 3sgr-a3-m3-cF 25 20 0.1529 0.5200 0.6500 1.7 3sgr-a3-m1-cC_3sgr-a3-m3-cF, 3sgr-a3-m3-cB_3sgr-a3-m3-cF, 3sgr-a3-m3-cE_3sgr-a3-m3-cF
41 3sgr-a3-m3-cE 25 20 0.1529 0.5200 0.6500 1.7 3sgr-a3-m3-cB_3sgr-a3-m3-cE, 3sgr-a3-m3-cE_3sgr-a3-m3-cF
42 3sgr-a3-m3-cB 25 20 0.1529 0.5200 0.6500 1.7 3sgr-a3-m1-cD_3sgr-a3-m3-cB, 3sgr-a3-m3-cB_3sgr-a3-m3-cE, 3sgr-a3-m3-cB_3sgr-a3-m3-cF
43 3sgr-a3-m1-cD 25 20 0.1529 0.5200 0.6500 1.7 3sgr-a3-m1-cD_3sgr-a3-m3-cB
44 3sgr-a2-m1-cE 25 20 0.1529 0.5200 0.6500 1.7 3sgr-a2-m1-cA_3sgr-a2-m1-cE
45 3sgr-a2-m1-cB 25 20 0.1529 0.5200 0.6500 1.7 3sgr-a2-m1-cA_3sgr-a2-m1-cB
46 3sgr-a2-m1-cA 25 20 0.1529 0.5200 0.6500 1.7 3sgr-a2-m1-cA_3sgr-a2-m1-cB, 3sgr-a2-m1-cA_3sgr-a2-m1-cE
47 3sgr-a3-m1-cC 24 20 0.1529 0.5417 0.6500 1.8 3sgr-a3-m1-cC_3sgr-a3-m3-cF
48 3msu-a1-m1-cA 415 27 0.0941 0.0193 0.2963 4.4 3msu-a1-m1-cA_3msu-a1-m1-cB
49 3msu-a1-m1-cB 426 27 0.0941 0.0188 0.2963 5.0 3msu-a1-m1-cA_3msu-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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