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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=85)
GMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQEHGFISRCFHRKYRIPAD
VDPLTITSSLSSDGVLTVNGPRKQV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4m5t-a3-m1-cC 85 85 1.0000 1.0000 1.0000 1.01e-58 4m5t-a3-m1-cA_4m5t-a3-m1-cC, 4m5t-a3-m1-cC_4m5t-a3-m1-cE, 4m5t-a3-m1-cC_4m5t-a3-m1-cG
2 4m5t-a3-m1-cG 86 86 1.0000 0.9884 0.9884 7.78e-57 4m5t-a3-m1-cC_4m5t-a3-m1-cG
3 4m5t-a3-m1-cE 85 85 0.9882 0.9882 0.9882 2.88e-56 4m5t-a3-m1-cC_4m5t-a3-m1-cE
4 3l1g-a1-m2-cA 95 85 0.9765 0.8737 0.9765 4.43e-54 3l1g-a1-m1-cA_3l1g-a1-m2-cA
5 3l1g-a1-m1-cA 95 85 0.9765 0.8737 0.9765 4.43e-54 3l1g-a1-m1-cA_3l1g-a1-m2-cA
6 4m5t-a3-m1-cA 82 85 0.9647 1.0000 0.9647 5.07e-54 4m5t-a3-m1-cA_4m5t-a3-m1-cC
7 2n0k-a1-m1-cB 89 85 0.9647 0.9213 0.9647 1.90e-53 2n0k-a1-m1-cA_2n0k-a1-m1-cB
8 2n0k-a1-m1-cA 89 85 0.9647 0.9213 0.9647 1.90e-53 2n0k-a1-m1-cA_2n0k-a1-m1-cB
9 3j07-a1-m1-cX 175 85 0.9765 0.4743 0.9765 2.64e-53 3j07-a1-m1-cG_3j07-a1-m1-cX, 3j07-a1-m1-cS_3j07-a1-m1-cX, 3j07-a1-m1-cW_3j07-a1-m1-cX
10 3j07-a1-m1-cW 175 85 0.9765 0.4743 0.9765 2.64e-53 3j07-a1-m1-cI_3j07-a1-m1-cW, 3j07-a1-m1-cW_3j07-a1-m1-cX
11 3j07-a1-m1-cS 175 85 0.9765 0.4743 0.9765 2.64e-53 3j07-a1-m1-cS_3j07-a1-m1-cX
12 3j07-a1-m1-cI 175 85 0.9765 0.4743 0.9765 2.64e-53 3j07-a1-m1-cI_3j07-a1-m1-cW
13 3j07-a1-m1-cG 175 85 0.9765 0.4743 0.9765 2.64e-53 3j07-a1-m1-cG_3j07-a1-m1-cX
14 2ygd-a1-m1-cX 175 85 0.9765 0.4743 0.9765 2.64e-53 2ygd-a1-m1-cU_2ygd-a1-m1-cX, 2ygd-a1-m1-cW_2ygd-a1-m1-cX
15 2ygd-a1-m1-cW 175 85 0.9765 0.4743 0.9765 2.64e-53 2ygd-a1-m1-cC_2ygd-a1-m1-cW, 2ygd-a1-m1-cW_2ygd-a1-m1-cX
16 2ygd-a1-m1-cV 175 85 0.9765 0.4743 0.9765 2.64e-53 2ygd-a1-m1-cF_2ygd-a1-m1-cV
17 2ygd-a1-m1-cU 175 85 0.9765 0.4743 0.9765 2.64e-53 2ygd-a1-m1-cF_2ygd-a1-m1-cU, 2ygd-a1-m1-cU_2ygd-a1-m1-cX
18 2ygd-a1-m1-cF 175 85 0.9765 0.4743 0.9765 2.64e-53 2ygd-a1-m1-cF_2ygd-a1-m1-cU, 2ygd-a1-m1-cF_2ygd-a1-m1-cV
19 2ygd-a1-m1-cC 175 85 0.9765 0.4743 0.9765 2.64e-53 2ygd-a1-m1-cC_2ygd-a1-m1-cW
20 6bp9-a1-m1-cB 89 85 0.9647 0.9213 0.9647 4.37e-53 6bp9-a1-m1-cA_6bp9-a1-m1-cB
21 6bp9-a1-m1-cA 89 85 0.9647 0.9213 0.9647 4.37e-53 6bp9-a1-m1-cA_6bp9-a1-m1-cB
22 2y1z-a1-m1-cA 85 84 0.9412 0.9412 0.9524 2.79e-52 2y1z-a1-m1-cA_2y1z-a1-m1-cB
23 2y1z-a1-m1-cB 87 83 0.9294 0.9080 0.9518 1.65e-51 2y1z-a1-m1-cA_2y1z-a1-m1-cB
24 2y1y-a1-m2-cA 77 78 0.8824 0.9740 0.9615 2.35e-46 2y1y-a1-m1-cA_2y1y-a1-m2-cA
25 2y1y-a1-m1-cA 77 78 0.8824 0.9740 0.9615 2.35e-46 2y1y-a1-m1-cA_2y1y-a1-m2-cA
26 3n3e-a1-m1-cB 104 82 0.5529 0.4519 0.5732 3.36e-30 3n3e-a1-m1-cB_3n3e-a1-m1-cA
27 3n3e-a1-m1-cA 106 82 0.5529 0.4434 0.5732 3.37e-30 3n3e-a1-m1-cB_3n3e-a1-m1-cA
28 6dv5-a1-m1-cK 175 83 0.5529 0.2686 0.5663 2.08e-28 6dv5-a1-m1-cJ_6dv5-a1-m1-cK
29 6dv5-a1-m1-cJ 162 79 0.5412 0.2840 0.5823 2.95e-28 6dv5-a1-m1-cJ_6dv5-a1-m1-cK
30 6dv5-a1-m1-cU 175 80 0.5412 0.2629 0.5750 6.29e-28 6dv5-a1-m1-cF_6dv5-a1-m1-cU
31 6dv5-a1-m1-cF 163 80 0.5412 0.2822 0.5750 6.55e-28 6dv5-a1-m1-cF_6dv5-a1-m1-cU
32 6dv5-a1-m1-cX 166 80 0.5412 0.2771 0.5750 7.07e-28 6dv5-a1-m1-cP_6dv5-a1-m1-cX
33 6dv5-a1-m1-cP 164 75 0.5294 0.2744 0.6000 2.48e-27 6dv5-a1-m1-cP_6dv5-a1-m1-cX
34 6f2r-a1-m1-cC 121 82 0.4235 0.2975 0.4390 1.23e-21 6f2r-a1-m1-cD_6f2r-a1-m1-cC
35 6f2r-a1-m1-cD 80 76 0.4000 0.4250 0.4474 1.71e-20 6f2r-a1-m1-cD_6f2r-a1-m1-cC
36 2bol-a1-m1-cA 301 73 0.2235 0.0631 0.2603 0.010 2bol-a1-m1-cB_2bol-a1-m1-cA
37 2bol-a1-m1-cA 301 65 0.2235 0.0631 0.2923 0.11 2bol-a1-m1-cB_2bol-a1-m1-cA
38 2bol-a1-m1-cB 290 65 0.2235 0.0655 0.2923 0.011 2bol-a1-m1-cB_2bol-a1-m1-cA
39 2bol-a1-m1-cB 290 73 0.2235 0.0655 0.2603 0.15 2bol-a1-m1-cB_2bol-a1-m1-cA
40 3sgr-a3-m1-cC 24 14 0.1412 0.5000 0.8571 2.4 3sgr-a3-m1-cC_3sgr-a3-m3-cF
41 3sgr-a3-m3-cF 25 14 0.1412 0.4800 0.8571 2.5 3sgr-a3-m1-cC_3sgr-a3-m3-cF, 3sgr-a3-m3-cB_3sgr-a3-m3-cF, 3sgr-a3-m3-cE_3sgr-a3-m3-cF
42 3sgr-a3-m3-cE 25 14 0.1412 0.4800 0.8571 2.5 3sgr-a3-m3-cB_3sgr-a3-m3-cE, 3sgr-a3-m3-cE_3sgr-a3-m3-cF
43 3sgr-a3-m3-cB 25 14 0.1412 0.4800 0.8571 2.5 3sgr-a3-m1-cD_3sgr-a3-m3-cB, 3sgr-a3-m3-cB_3sgr-a3-m3-cE, 3sgr-a3-m3-cB_3sgr-a3-m3-cF
44 3sgr-a3-m1-cD 25 14 0.1412 0.4800 0.8571 2.5 3sgr-a3-m1-cD_3sgr-a3-m3-cB
45 3sgr-a2-m1-cE 25 14 0.1412 0.4800 0.8571 2.5 3sgr-a2-m1-cA_3sgr-a2-m1-cE
46 3sgr-a2-m1-cB 25 14 0.1412 0.4800 0.8571 2.5 3sgr-a2-m1-cA_3sgr-a2-m1-cB
47 3sgr-a2-m1-cA 25 14 0.1412 0.4800 0.8571 2.5 3sgr-a2-m1-cA_3sgr-a2-m1-cB, 3sgr-a2-m1-cA_3sgr-a2-m1-cE
48 2nvv-a3-m1-cF 484 52 0.1882 0.0331 0.3077 4.2 2nvv-a3-m1-cE_2nvv-a3-m1-cF
49 2nvv-a3-m1-cE 484 52 0.1882 0.0331 0.3077 4.2 2nvv-a3-m1-cE_2nvv-a3-m1-cF
50 3msu-a1-m1-cA 415 27 0.0941 0.0193 0.2963 4.4 3msu-a1-m1-cA_3msu-a1-m1-cB
51 3msu-a1-m1-cB 426 27 0.0941 0.0188 0.2963 4.7 3msu-a1-m1-cA_3msu-a1-m1-cB
52 3a2m-a1-m1-cA 298 42 0.1294 0.0369 0.2619 6.5 3a2m-a1-m1-cA_3a2m-a1-m1-cB
53 3a2m-a1-m1-cB 300 42 0.1294 0.0367 0.2619 6.5 3a2m-a1-m1-cA_3a2m-a1-m1-cB
54 3cu7-a3-m1-cA 1625 81 0.3059 0.0160 0.3210 6.9 3cu7-a3-m1-cB_3cu7-a3-m1-cA
55 3cu7-a3-m1-cB 1481 81 0.3059 0.0176 0.3210 7.9 3cu7-a3-m1-cB_3cu7-a3-m1-cA

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Reference:
Jacob Schwartz et al.

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