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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=89)
GMSDAFTDVAKMKKIKEEIKAHEGQVVEMTLENGRKRQKNRLGKLIEVYPSLFIVEFGDV
EGDKQVNVYVESFTYSDILTEKNLIHYLD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3fb9-a1-m1-cA 89 89 1.0000 1.0000 1.0000 1.73e-61 3fb9-a1-m1-cB_3fb9-a1-m1-cA
2 3fb9-a1-m1-cB 84 89 0.9326 0.9881 0.9326 1.02e-53 3fb9-a1-m1-cB_3fb9-a1-m1-cA
3 1twf-a2-m2-cB 1094 54 0.2022 0.0165 0.3333 3.7 1twf-a2-m1-cB_1twf-a2-m2-cB
4 1twf-a2-m1-cB 1094 54 0.2022 0.0165 0.3333 3.7 1twf-a2-m1-cB_1twf-a2-m2-cB
5 1oph-a2-m2-cA 375 28 0.1573 0.0373 0.5000 9.3 1oph-a2-m1-cA_1oph-a2-m2-cA
6 1oph-a2-m1-cA 375 28 0.1573 0.0373 0.5000 9.3 1oph-a2-m1-cA_1oph-a2-m2-cA
7 3t1p-a1-m3-cA 371 38 0.1910 0.0458 0.4474 9.6 3t1p-a1-m2-cA_3t1p-a1-m3-cA
8 3t1p-a1-m2-cA 371 38 0.1910 0.0458 0.4474 9.6 3t1p-a1-m2-cA_3t1p-a1-m3-cA

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Reference:
Jacob Schwartz et al.

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