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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=22)
GNADEYKEEDQERLRKLRKKLR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4g4m-a1-m2-cB 22 22 1.0000 1.0000 1.0000 1.43e-08 4g4m-a1-m2-cA_4g4m-a1-m2-cB
2 4g4m-a1-m2-cA 22 22 1.0000 1.0000 1.0000 1.43e-08 4g4m-a1-m2-cA_4g4m-a1-m2-cB
3 4g3b-a2-m1-cB 23 23 0.9545 0.9130 0.9130 2.43e-04 4g3b-a2-m1-cA_4g3b-a2-m1-cB
4 4g3b-a2-m1-cA 23 23 0.9545 0.9130 0.9130 2.43e-04 4g3b-a2-m1-cA_4g3b-a2-m1-cB
5 3twf-a2-m1-cB 23 21 0.7273 0.6957 0.7619 0.069 3twf-a2-m1-cA_3twf-a2-m1-cB
6 3twf-a2-m1-cA 22 21 0.7273 0.7273 0.7619 0.078 3twf-a2-m1-cA_3twf-a2-m1-cB
7 7zkk-a1-m4-cA 669 21 0.3636 0.0120 0.3810 4.5 7zkk-a1-m1-cA_7zkk-a1-m4-cA
8 7zkk-a1-m1-cA 669 21 0.3636 0.0120 0.3810 4.5 7zkk-a1-m1-cA_7zkk-a1-m4-cA
9 6qss-a1-m1-cC 305 15 0.3636 0.0262 0.5333 4.9 6qss-a1-m1-cD_6qss-a1-m1-cC
10 6qss-a1-m1-cA 303 15 0.3636 0.0264 0.5333 4.9 6qss-a1-m1-cD_6qss-a1-m1-cA
11 6qss-a1-m1-cD 299 15 0.3636 0.0268 0.5333 4.9 6qss-a1-m1-cD_6qss-a1-m1-cA, 6qss-a1-m1-cD_6qss-a1-m1-cB, 6qss-a1-m1-cD_6qss-a1-m1-cC
12 6qss-a1-m1-cB 307 15 0.3636 0.0261 0.5333 4.9 6qss-a1-m1-cD_6qss-a1-m1-cB
13 5kbp-a1-m1-cA 886 19 0.4091 0.0102 0.4737 6.7 5kbp-a1-m1-cB_5kbp-a1-m1-cA
14 5kbp-a1-m1-cB 884 19 0.4091 0.0102 0.4737 7.1 5kbp-a1-m1-cB_5kbp-a1-m1-cA
15 5ks8-a1-m1-cD 580 15 0.4091 0.0155 0.6000 8.0 5ks8-a1-m1-cD_5ks8-a1-m1-cC
16 5ks8-a1-m1-cC 603 15 0.4091 0.0149 0.6000 9.9 5ks8-a1-m1-cD_5ks8-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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