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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=79)
GNIYQITVEEKAEHQRTLSFEFSLHDDLFKLLEKVDGKDTPEQTQAFVGLKLFGEVQQRK
HPLFKEFSAPFRAFNLKKQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3cjl-a1-m1-cA 80 79 1.0000 0.9875 1.0000 3.20e-53 3cjl-a1-m1-cB_3cjl-a1-m1-cA
2 3cjl-a1-m1-cB 79 79 1.0000 1.0000 1.0000 3.21e-53 3cjl-a1-m1-cB_3cjl-a1-m1-cA
3 2onh-a1-m1-cB 543 46 0.2025 0.0295 0.3478 0.26 2onh-a1-m1-cA_2onh-a1-m1-cB
4 2onh-a1-m1-cA 543 46 0.2025 0.0295 0.3478 0.26 2onh-a1-m1-cA_2onh-a1-m1-cB
5 5koh-a1-m1-cD 510 35 0.1519 0.0235 0.3429 4.1 5koh-a1-m1-cB_5koh-a1-m1-cD
6 5koh-a1-m1-cB 510 35 0.1519 0.0235 0.3429 4.1 5koh-a1-m1-cB_5koh-a1-m1-cD
7 7bra-a1-m1-cB 445 23 0.1013 0.0180 0.3478 5.9 7bra-a1-m1-cA_7bra-a1-m1-cB
8 7bra-a1-m1-cA 445 23 0.1013 0.0180 0.3478 5.9 7bra-a1-m1-cA_7bra-a1-m1-cB
9 6c8z-a1-m2-cA 488 22 0.1266 0.0205 0.4545 9.8 6c8z-a1-m1-cA_6c8z-a1-m2-cA
10 6c8z-a1-m1-cA 488 22 0.1266 0.0205 0.4545 9.8 6c8z-a1-m1-cA_6c8z-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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