Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=84)
GNLRVTDVTSTSVTLSWRGYPWATGYRVEYREAGGEWKEVTVPGDLSHRYTVTGLKPGTE
YEFRVRAVNRPSSVSVTTGHHHHH

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 5j7k-a1-m1-cA 84 84 1.0000 1.0000 1.0000 9.76e-57 5j7k-a1-m1-cC_5j7k-a1-m1-cA
2 5j7k-a2-m1-cB 90 87 0.9762 0.9111 0.9425 4.94e-52 5j7k-a2-m1-cF_5j7k-a2-m1-cB
3 5j7k-a2-m1-cG 85 86 0.9762 0.9647 0.9535 4.17e-51 5j7k-a2-m1-cD_5j7k-a2-m1-cG
4 5j7k-a2-m1-cF 79 82 0.9405 1.0000 0.9634 3.32e-50 5j7k-a2-m1-cF_5j7k-a2-m1-cB
5 5j7k-a1-m1-cC 78 84 0.9286 1.0000 0.9286 1.49e-47 5j7k-a1-m1-cC_5j7k-a1-m1-cA
6 5j7k-a2-m1-cD 54 77 0.5714 0.8889 0.6234 1.61e-17 5j7k-a2-m1-cD_5j7k-a2-m1-cG
7 4lpu-a1-m1-cB 93 88 0.4286 0.3871 0.4091 1.24e-11 4lpu-a1-m1-cA_4lpu-a1-m1-cB
8 4lpu-a1-m1-cA 93 88 0.4286 0.3871 0.4091 1.24e-11 4lpu-a1-m1-cA_4lpu-a1-m1-cB
9 4yfg-a1-m1-cB 481 67 0.3214 0.0561 0.4030 3.53e-07 4yfg-a1-m1-cA_4yfg-a1-m1-cB
10 4yfg-a1-m1-cA 481 67 0.3214 0.0561 0.4030 3.53e-07 4yfg-a1-m1-cA_4yfg-a1-m1-cB
11 2ck2-a1-m1-cA 94 84 0.3571 0.3191 0.3571 6.11e-07 2ck2-a1-m1-cA_2ck2-a1-m1-cB
12 2ck2-a1-m1-cB 96 70 0.3333 0.2917 0.4000 6.56e-07 2ck2-a1-m1-cA_2ck2-a1-m1-cB
13 3b83-a1-m8-cG 99 95 0.3929 0.3333 0.3474 7.42e-07 3b83-a1-m2-cA_3b83-a1-m8-cG, 3b83-a1-m2-cE_3b83-a1-m8-cG
14 3b83-a1-m4-cE 99 95 0.3929 0.3333 0.3474 7.42e-07 3b83-a1-m1-cC_3b83-a1-m4-cE, 3b83-a1-m4-cC_3b83-a1-m4-cE, 3b83-a1-m4-cF_3b83-a1-m4-cE
15 3b83-a1-m4-cC 99 95 0.3929 0.3333 0.3474 7.42e-07 3b83-a1-m4-cC_3b83-a1-m4-cE
16 3b83-a1-m2-cE 99 95 0.3929 0.3333 0.3474 7.42e-07 3b83-a1-m2-cE_3b83-a1-m8-cG
17 3b83-a1-m1-cC 99 95 0.3929 0.3333 0.3474 7.42e-07 3b83-a1-m1-cC_3b83-a1-m4-cE
18 6bqo-a2-m2-cC 95 70 0.3452 0.3053 0.4143 4.12e-06 6bqo-a2-m1-cC_6bqo-a2-m2-cC
19 6bqo-a2-m1-cC 95 70 0.3452 0.3053 0.4143 4.12e-06 6bqo-a2-m1-cC_6bqo-a2-m2-cC
20 3b83-a1-m2-cA 95 91 0.3452 0.3053 0.3187 1.27e-04 3b83-a1-m2-cA_3b83-a1-m8-cG, 3b83-a1-m8-cB_3b83-a1-m2-cA
21 7y8s-a1-m1-cA 275 47 0.2381 0.0727 0.4255 0.001 7y8s-a1-m1-cA_7y8s-a1-m1-cB
22 7y8s-a1-m1-cA 275 46 0.1667 0.0509 0.3043 8.4 7y8s-a1-m1-cA_7y8s-a1-m1-cB
23 7y8s-a1-m1-cB 288 47 0.2381 0.0694 0.4255 0.001 7y8s-a1-m1-cA_7y8s-a1-m1-cB
24 7y8s-a1-m1-cB 288 46 0.1667 0.0486 0.3043 9.4 7y8s-a1-m1-cA_7y8s-a1-m1-cB
25 3b83-a1-m8-cB 92 88 0.3333 0.3043 0.3182 0.001 3b83-a1-m8-cB_3b83-a1-m2-cA, 3b83-a1-m8-cD_3b83-a1-m8-cB
26 3b83-a1-m4-cF 92 88 0.3333 0.3043 0.3182 0.001 3b83-a1-m4-cF_3b83-a1-m4-cE
27 3b83-a5-m1-cD 91 88 0.3333 0.3077 0.3182 0.001 3b83-a5-m1-cD_3b83-a5-m1-cH
28 3b83-a1-m8-cD 91 88 0.3333 0.3077 0.3182 0.001 3b83-a1-m8-cD_3b83-a1-m8-cB
29 3b83-a1-m5-cD 91 88 0.3333 0.3077 0.3182 0.001 3b83-a1-m5-cD_3b83-a1-m8-cH
30 3b83-a5-m1-cH 94 88 0.3333 0.2979 0.3182 0.001 3b83-a5-m1-cD_3b83-a5-m1-cH
31 3b83-a1-m8-cH 94 88 0.3333 0.2979 0.3182 0.001 3b83-a1-m5-cD_3b83-a1-m8-cH
32 1bqu-a1-m1-cA 208 74 0.2738 0.1106 0.3108 0.002 1bqu-a1-m1-cA_1bqu-a1-m1-cB
33 7mrm-a1-m1-cA 365 77 0.2976 0.0685 0.3247 0.003 7mrm-a1-m1-cB_7mrm-a1-m1-cA
34 7mrm-a1-m1-cB 360 77 0.2976 0.0694 0.3247 0.003 7mrm-a1-m1-cB_7mrm-a1-m1-cA
35 3t1w-a1-m2-cA 368 70 0.2738 0.0625 0.3286 0.009 3t1w-a1-m1-cA_3t1w-a1-m2-cA
36 3t1w-a1-m2-cA 368 71 0.2976 0.0679 0.3521 0.048 3t1w-a1-m1-cA_3t1w-a1-m2-cA
37 3t1w-a1-m2-cA 368 72 0.2500 0.0571 0.2917 2.3 3t1w-a1-m1-cA_3t1w-a1-m2-cA
38 3t1w-a1-m1-cA 368 70 0.2738 0.0625 0.3286 0.009 3t1w-a1-m1-cA_3t1w-a1-m2-cA
39 3t1w-a1-m1-cA 368 71 0.2976 0.0679 0.3521 0.048 3t1w-a1-m1-cA_3t1w-a1-m2-cA
40 3t1w-a1-m1-cA 368 72 0.2500 0.0571 0.2917 2.3 3t1w-a1-m1-cA_3t1w-a1-m2-cA
41 1bqu-a1-m1-cB 215 46 0.2024 0.0791 0.3696 0.014 1bqu-a1-m1-cA_1bqu-a1-m1-cB
42 5x83-a1-m1-cD 195 35 0.2262 0.0974 0.5429 0.039 5x83-a1-m1-cD_5x83-a1-m1-cB
43 5x83-a1-m1-cB 202 35 0.2262 0.0941 0.5429 0.043 5x83-a1-m1-cD_5x83-a1-m1-cB
44 2rbl-a1-m1-cB 89 67 0.2143 0.2022 0.2687 0.11 2rbl-a1-m1-cA_2rbl-a1-m1-cB
45 2rbl-a1-m1-cA 89 67 0.2143 0.2022 0.2687 0.11 2rbl-a1-m1-cA_2rbl-a1-m1-cB
46 3g1w-a1-m1-cB 284 39 0.1667 0.0493 0.3590 0.13 3g1w-a1-m1-cB_3g1w-a1-m1-cA
47 3g1w-a1-m1-cA 285 39 0.1667 0.0491 0.3590 0.14 3g1w-a1-m1-cB_3g1w-a1-m1-cA
48 8d7h-a1-m1-cE 303 53 0.2143 0.0594 0.3396 0.35 8d7h-a1-m1-cA_8d7h-a1-m1-cE
49 8d7h-a1-m1-cA 303 53 0.2143 0.0594 0.3396 0.35 8d7h-a1-m1-cA_8d7h-a1-m1-cE
50 5myb-a1-m1-cB 191 74 0.2143 0.0942 0.2432 0.41 5myb-a1-m1-cA_5myb-a1-m1-cB
51 5myb-a1-m1-cA 190 74 0.2143 0.0947 0.2432 0.48 5myb-a1-m1-cA_5myb-a1-m1-cB
52 3mtr-a1-m1-cA 197 63 0.2738 0.1168 0.3651 0.83 3mtr-a1-m1-cA_3mtr-a1-m1-cB
53 3mtr-a1-m1-cB 197 63 0.2738 0.1168 0.3651 0.85 3mtr-a1-m1-cA_3mtr-a1-m1-cB
54 2vkx-a2-m1-cD 198 63 0.2738 0.1162 0.3651 1.1 2vkx-a2-m1-cC_2vkx-a2-m1-cD
55 2vkx-a2-m1-cC 198 63 0.2738 0.1162 0.3651 1.1 2vkx-a2-m1-cC_2vkx-a2-m1-cD
56 2vkw-a1-m1-cB 195 63 0.2738 0.1179 0.3651 1.1 2vkw-a1-m1-cB_2vkw-a1-m1-cA
57 2vkw-a1-m1-cA 197 63 0.2738 0.1168 0.3651 1.1 2vkw-a1-m1-cB_2vkw-a1-m1-cA
58 5utk-a1-m1-cA 289 85 0.2500 0.0727 0.2471 1.3 5utk-a1-m1-cB_5utk-a1-m1-cA
59 7bu2-a1-m1-cB 339 59 0.1905 0.0472 0.2712 1.4 7bu2-a1-m1-cA_7bu2-a1-m1-cB
60 7bu2-a1-m1-cA 337 59 0.1905 0.0475 0.2712 1.5 7bu2-a1-m1-cA_7bu2-a1-m1-cB
61 7bu3-a1-m1-cA 336 59 0.1905 0.0476 0.2712 1.5 7bu3-a1-m1-cA_7bu3-a1-m1-cB
62 7bu3-a1-m1-cB 337 59 0.1905 0.0475 0.2712 1.5 7bu3-a1-m1-cA_7bu3-a1-m1-cB
63 8a1f-a1-m1-cA 353 48 0.2381 0.0567 0.4167 2.0 8a1f-a1-m1-cB_8a1f-a1-m1-cA
64 8a1f-a1-m1-cB 352 47 0.2381 0.0568 0.4255 2.1 8a1f-a1-m1-cB_8a1f-a1-m1-cA
65 5n06-a1-m1-cA 93 71 0.2619 0.2366 0.3099 2.2 5n06-a1-m1-cB_5n06-a1-m1-cA
66 4bkf-a1-m1-cB 505 69 0.2381 0.0396 0.2899 2.2 4bkf-a1-m1-cA_4bkf-a1-m1-cB
67 4bkf-a1-m1-cA 505 69 0.2381 0.0396 0.2899 2.2 4bkf-a1-m1-cA_4bkf-a1-m1-cB
68 3a70-a1-m1-cA 608 40 0.1548 0.0214 0.3250 3.0 3a70-a1-m1-cA_3a70-a1-m1-cC
69 5e7t-a1-m3-cA 129 17 0.1310 0.0853 0.6471 3.3 5e7t-a1-m2-cA_5e7t-a1-m3-cA
70 5e7t-a1-m2-cA 129 17 0.1310 0.0853 0.6471 3.3 5e7t-a1-m2-cA_5e7t-a1-m3-cA
71 7cg8-a1-m1-cC 100 23 0.1310 0.1100 0.4783 4.0 7cg8-a1-m1-cC_7cg8-a1-m1-cD
72 7cg8-a1-m1-cD 105 23 0.1310 0.1048 0.4783 4.7 7cg8-a1-m1-cA_7cg8-a1-m1-cD, 7cg8-a1-m1-cB_7cg8-a1-m1-cD, 7cg8-a1-m1-cC_7cg8-a1-m1-cD
73 7cg8-a1-m1-cB 105 23 0.1310 0.1048 0.4783 4.7 7cg8-a1-m1-cB_7cg8-a1-m1-cD
74 7cg8-a1-m1-cA 105 23 0.1310 0.1048 0.4783 4.7 7cg8-a1-m1-cA_7cg8-a1-m1-cD
75 2vr5-a1-m3-cA 715 28 0.1429 0.0168 0.4286 5.7 2vr5-a1-m3-cB_2vr5-a1-m3-cA
76 2vr5-a1-m2-cA 715 28 0.1429 0.0168 0.4286 5.7 2vr5-a1-m3-cB_2vr5-a1-m2-cA
77 2vr5-a1-m3-cB 714 28 0.1429 0.0168 0.4286 5.8 2vr5-a1-m2-cB_2vr5-a1-m3-cB, 2vr5-a1-m3-cB_2vr5-a1-m2-cA, 2vr5-a1-m3-cB_2vr5-a1-m3-cA
78 2vr5-a1-m2-cB 714 28 0.1429 0.0168 0.4286 5.8 2vr5-a1-m2-cB_2vr5-a1-m3-cB
79 2vnc-a1-m1-cA 699 28 0.1429 0.0172 0.4286 6.1 2vnc-a1-m2-cB_2vnc-a1-m1-cA
80 2vnc-a1-m2-cB 666 28 0.1429 0.0180 0.4286 6.5 2vnc-a1-m1-cB_2vnc-a1-m2-cB, 2vnc-a1-m2-cB_2vnc-a1-m1-cA
81 2vnc-a1-m1-cB 666 28 0.1429 0.0180 0.4286 6.5 2vnc-a1-m1-cB_2vnc-a1-m2-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600