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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=78)
GNLRVTDVTSTSVTLSWRGYPWATGYRVEYREAGGEWKEVTVPHRYTVTGLKPGTEYEFR
VRAVNRSVSVTTGHHHHH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5j7k-a1-m1-cC 78 78 1.0000 1.0000 1.0000 7.71e-52 5j7k-a1-m1-cC_5j7k-a1-m1-cA
2 5j7k-a1-m1-cA 84 84 1.0000 0.9286 0.9286 1.39e-47 5j7k-a1-m1-cC_5j7k-a1-m1-cA
3 5j7k-a2-m1-cB 90 87 1.0000 0.8667 0.8966 8.05e-47 5j7k-a2-m1-cF_5j7k-a2-m1-cB
4 5j7k-a2-m1-cF 79 80 0.9487 0.9367 0.9250 1.01e-44 5j7k-a2-m1-cF_5j7k-a2-m1-cB
5 5j7k-a2-m1-cG 85 86 0.9744 0.8941 0.8837 1.06e-43 5j7k-a2-m1-cD_5j7k-a2-m1-cG
6 5j7k-a2-m1-cD 54 71 0.6154 0.8889 0.6761 1.74e-18 5j7k-a2-m1-cD_5j7k-a2-m1-cG
7 4lpu-a1-m1-cB 93 87 0.4359 0.3656 0.3908 4.50e-09 4lpu-a1-m1-cA_4lpu-a1-m1-cB
8 4lpu-a1-m1-cA 93 87 0.4359 0.3656 0.3908 4.50e-09 4lpu-a1-m1-cA_4lpu-a1-m1-cB
9 4yfg-a1-m1-cB 481 71 0.3718 0.0603 0.4085 2.64e-06 4yfg-a1-m1-cA_4yfg-a1-m1-cB
10 4yfg-a1-m1-cA 481 71 0.3718 0.0603 0.4085 2.64e-06 4yfg-a1-m1-cA_4yfg-a1-m1-cB
11 2ck2-a1-m1-cB 96 69 0.3333 0.2708 0.3768 8.96e-06 2ck2-a1-m1-cA_2ck2-a1-m1-cB
12 2ck2-a1-m1-cA 94 69 0.3333 0.2766 0.3768 9.12e-06 2ck2-a1-m1-cA_2ck2-a1-m1-cB
13 3b83-a1-m8-cG 99 93 0.3846 0.3030 0.3226 6.48e-05 3b83-a1-m2-cA_3b83-a1-m8-cG, 3b83-a1-m2-cE_3b83-a1-m8-cG
14 3b83-a1-m4-cE 99 93 0.3846 0.3030 0.3226 6.48e-05 3b83-a1-m1-cC_3b83-a1-m4-cE, 3b83-a1-m4-cC_3b83-a1-m4-cE, 3b83-a1-m4-cF_3b83-a1-m4-cE
15 3b83-a1-m4-cC 99 93 0.3846 0.3030 0.3226 6.48e-05 3b83-a1-m4-cC_3b83-a1-m4-cE
16 3b83-a1-m2-cE 99 93 0.3846 0.3030 0.3226 6.48e-05 3b83-a1-m2-cE_3b83-a1-m8-cG
17 3b83-a1-m1-cC 99 93 0.3846 0.3030 0.3226 6.48e-05 3b83-a1-m1-cC_3b83-a1-m4-cE
18 6bqo-a2-m2-cC 95 69 0.3462 0.2842 0.3913 1.26e-04 6bqo-a2-m1-cC_6bqo-a2-m2-cC
19 6bqo-a2-m1-cC 95 69 0.3462 0.2842 0.3913 1.26e-04 6bqo-a2-m1-cC_6bqo-a2-m2-cC
20 3t1w-a1-m2-cA 368 70 0.3333 0.0707 0.3714 0.002 3t1w-a1-m1-cA_3t1w-a1-m2-cA
21 3t1w-a1-m2-cA 368 68 0.2949 0.0625 0.3382 0.003 3t1w-a1-m1-cA_3t1w-a1-m2-cA
22 3t1w-a1-m2-cA 368 70 0.2436 0.0516 0.2714 8.5 3t1w-a1-m1-cA_3t1w-a1-m2-cA
23 3t1w-a1-m1-cA 368 70 0.3333 0.0707 0.3714 0.002 3t1w-a1-m1-cA_3t1w-a1-m2-cA
24 3t1w-a1-m1-cA 368 68 0.2949 0.0625 0.3382 0.003 3t1w-a1-m1-cA_3t1w-a1-m2-cA
25 3t1w-a1-m1-cA 368 70 0.2436 0.0516 0.2714 8.5 3t1w-a1-m1-cA_3t1w-a1-m2-cA
26 3b83-a1-m2-cA 95 89 0.3333 0.2737 0.2921 0.012 3b83-a1-m2-cA_3b83-a1-m8-cG, 3b83-a1-m8-cB_3b83-a1-m2-cA
27 1bqu-a1-m1-cA 208 74 0.2692 0.1010 0.2838 0.017 1bqu-a1-m1-cA_1bqu-a1-m1-cB
28 7mrm-a1-m1-cA 365 77 0.3333 0.0712 0.3377 0.021 7mrm-a1-m1-cB_7mrm-a1-m1-cA
29 7mrm-a1-m1-cB 360 77 0.3333 0.0722 0.3377 0.022 7mrm-a1-m1-cB_7mrm-a1-m1-cA
30 3b83-a1-m8-cB 92 70 0.2692 0.2283 0.3000 0.032 3b83-a1-m8-cB_3b83-a1-m2-cA, 3b83-a1-m8-cD_3b83-a1-m8-cB
31 3b83-a1-m4-cF 92 70 0.2692 0.2283 0.3000 0.032 3b83-a1-m4-cF_3b83-a1-m4-cE
32 3b83-a5-m1-cD 91 70 0.2692 0.2308 0.3000 0.034 3b83-a5-m1-cD_3b83-a5-m1-cH
33 3b83-a1-m8-cD 91 70 0.2692 0.2308 0.3000 0.034 3b83-a1-m8-cD_3b83-a1-m8-cB
34 3b83-a1-m5-cD 91 70 0.2692 0.2308 0.3000 0.034 3b83-a1-m5-cD_3b83-a1-m8-cH
35 3b83-a5-m1-cH 94 70 0.2692 0.2234 0.3000 0.035 3b83-a5-m1-cD_3b83-a5-m1-cH
36 3b83-a1-m8-cH 94 70 0.2692 0.2234 0.3000 0.035 3b83-a1-m5-cD_3b83-a1-m8-cH
37 7y8s-a1-m1-cA 275 47 0.2564 0.0727 0.4255 0.041 7y8s-a1-m1-cA_7y8s-a1-m1-cB
38 7y8s-a1-m1-cA 275 52 0.2051 0.0582 0.3077 4.5 7y8s-a1-m1-cA_7y8s-a1-m1-cB
39 7y8s-a1-m1-cB 288 47 0.2564 0.0694 0.4255 0.047 7y8s-a1-m1-cA_7y8s-a1-m1-cB
40 7y8s-a1-m1-cB 288 52 0.2051 0.0556 0.3077 5.1 7y8s-a1-m1-cA_7y8s-a1-m1-cB
41 5x83-a1-m1-cD 195 36 0.1923 0.0769 0.4167 0.11 5x83-a1-m1-cD_5x83-a1-m1-cB
42 5x83-a1-m1-cB 202 36 0.1923 0.0743 0.4167 0.11 5x83-a1-m1-cD_5x83-a1-m1-cB
43 1bqu-a1-m1-cB 215 46 0.1923 0.0698 0.3261 0.14 1bqu-a1-m1-cA_1bqu-a1-m1-cB
44 3mtr-a1-m1-cA 197 59 0.2821 0.1117 0.3729 0.15 3mtr-a1-m1-cA_3mtr-a1-m1-cB
45 3mtr-a1-m1-cB 197 59 0.2821 0.1117 0.3729 0.16 3mtr-a1-m1-cA_3mtr-a1-m1-cB
46 2vkw-a1-m1-cA 197 59 0.2821 0.1117 0.3729 0.19 2vkw-a1-m1-cB_2vkw-a1-m1-cA
47 2vkw-a1-m1-cB 195 59 0.2821 0.1128 0.3729 0.19 2vkw-a1-m1-cB_2vkw-a1-m1-cA
48 2vkx-a2-m1-cD 198 59 0.2821 0.1111 0.3729 0.20 2vkx-a2-m1-cC_2vkx-a2-m1-cD
49 2vkx-a2-m1-cC 198 59 0.2821 0.1111 0.3729 0.20 2vkx-a2-m1-cC_2vkx-a2-m1-cD
50 2rbl-a1-m1-cB 89 67 0.2179 0.1910 0.2537 0.57 2rbl-a1-m1-cA_2rbl-a1-m1-cB
51 2rbl-a1-m1-cA 89 67 0.2179 0.1910 0.2537 0.57 2rbl-a1-m1-cA_2rbl-a1-m1-cB
52 5myb-a1-m1-cB 191 86 0.2821 0.1152 0.2558 0.64 5myb-a1-m1-cA_5myb-a1-m1-cB
53 5myb-a1-m1-cA 190 86 0.2821 0.1158 0.2558 0.70 5myb-a1-m1-cA_5myb-a1-m1-cB
54 8a1f-a1-m1-cA 353 37 0.2308 0.0510 0.4865 0.70 8a1f-a1-m1-cB_8a1f-a1-m1-cA
55 8a1f-a1-m1-cB 352 37 0.2308 0.0511 0.4865 0.72 8a1f-a1-m1-cB_8a1f-a1-m1-cA
56 4yg8-a2-m6-cA 276 75 0.2692 0.0761 0.2800 0.92 4yg8-a2-m3-cA_4yg8-a2-m6-cA
57 4yg8-a2-m3-cA 276 75 0.2692 0.0761 0.2800 0.92 4yg8-a2-m3-cA_4yg8-a2-m6-cA
58 8d7h-a1-m1-cE 303 50 0.2051 0.0528 0.3200 1.1 8d7h-a1-m1-cA_8d7h-a1-m1-cE
59 8d7h-a1-m1-cA 303 50 0.2051 0.0528 0.3200 1.1 8d7h-a1-m1-cA_8d7h-a1-m1-cE
60 5utk-a1-m1-cA 289 85 0.2821 0.0761 0.2588 1.2 5utk-a1-m1-cB_5utk-a1-m1-cA
61 5n06-a1-m1-cA 93 69 0.2692 0.2258 0.3043 1.8 5n06-a1-m1-cB_5n06-a1-m1-cA
62 5e7t-a1-m3-cA 129 17 0.1410 0.0853 0.6471 2.5 5e7t-a1-m2-cA_5e7t-a1-m3-cA
63 5e7t-a1-m2-cA 129 17 0.1410 0.0853 0.6471 2.5 5e7t-a1-m2-cA_5e7t-a1-m3-cA
64 7bu2-a1-m1-cB 339 59 0.2051 0.0472 0.2712 2.5 7bu2-a1-m1-cA_7bu2-a1-m1-cB
65 7bu2-a1-m1-cA 337 59 0.2051 0.0475 0.2712 2.6 7bu2-a1-m1-cA_7bu2-a1-m1-cB
66 7bu3-a1-m1-cA 336 59 0.2051 0.0476 0.2712 2.7 7bu3-a1-m1-cA_7bu3-a1-m1-cB
67 7bu3-a1-m1-cB 337 59 0.2051 0.0475 0.2712 2.7 7bu3-a1-m1-cA_7bu3-a1-m1-cB
68 5jsd-a1-m1-cC 548 33 0.1538 0.0219 0.3636 2.8 5jsd-a1-m1-cB_5jsd-a1-m1-cC
69 5jsd-a1-m1-cB 548 33 0.1538 0.0219 0.3636 2.8 5jsd-a1-m1-cB_5jsd-a1-m1-cC
70 1qvw-a1-m1-cB 235 43 0.1410 0.0468 0.2558 2.8 1qvw-a1-m1-cA_1qvw-a1-m1-cB
71 1qvw-a1-m1-cA 235 43 0.1410 0.0468 0.2558 2.8 1qvw-a1-m1-cA_1qvw-a1-m1-cB
72 3fcd-a1-m1-cB 116 31 0.1538 0.1034 0.3871 3.7 3fcd-a1-m1-cA_3fcd-a1-m1-cB
73 5u3f-a1-m1-cA 326 27 0.1667 0.0399 0.4815 3.7 5u3f-a1-m1-cA_5u3f-a1-m1-cB
74 5u3f-a1-m1-cB 328 27 0.1667 0.0396 0.4815 3.7 5u3f-a1-m1-cA_5u3f-a1-m1-cB
75 2a1f-a3-m1-cD 236 27 0.1282 0.0424 0.3704 4.4 2a1f-a3-m1-cD_2a1f-a3-m1-cC

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Reference:
Jacob Schwartz et al.

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