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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=62)
GNTLVVLHKSGLLEITLKTKELIRQNQATQAELDQLKEQTQFIEATKSRAPQAWAKLQAS
LT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5vjx-a3-m1-cU 62 62 1.0000 1.0000 1.0000 1.10e-38 5vjx-a3-m1-cG_5vjx-a3-m1-cU
2 5vjx-a3-m1-cG 62 62 1.0000 1.0000 1.0000 1.10e-38 5vjx-a3-m1-cG_5vjx-a3-m1-cU
3 5w3d-a1-m1-cB 313 22 0.1774 0.0351 0.5000 4.5 5w3d-a1-m1-cB_5w3d-a1-m1-cA
4 5w3d-a1-m1-cA 354 22 0.1774 0.0311 0.5000 5.0 5w3d-a1-m1-cB_5w3d-a1-m1-cA
5 1cz7-a3-m2-cD 365 22 0.1774 0.0301 0.5000 6.4 1cz7-a3-m1-cD_1cz7-a3-m2-cD, 1cz7-a3-m2-cC_1cz7-a3-m2-cD
6 1cz7-a3-m1-cD 365 22 0.1774 0.0301 0.5000 6.4 1cz7-a3-m1-cD_1cz7-a3-m2-cD
7 1n6m-a2-m2-cA 362 22 0.1774 0.0304 0.5000 6.5 1n6m-a2-m1-cA_1n6m-a2-m2-cA
8 1n6m-a2-m1-cA 362 22 0.1774 0.0304 0.5000 6.5 1n6m-a2-m1-cA_1n6m-a2-m2-cA
9 1cz7-a3-m2-cC 364 22 0.1774 0.0302 0.5000 6.6 1cz7-a3-m2-cC_1cz7-a3-m2-cD

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Reference:
Jacob Schwartz et al.

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