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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=65)
GPALNTEKMKTMLKAGMTVDDYAAKLKLTDKIAAAANSARAMEKLGETLKMKKLLRYLNY
VAEHT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3zrg-a1-m1-cA 66 65 1.0000 0.9848 1.0000 5.94e-41 3zrg-a1-m1-cB_3zrg-a1-m1-cA
2 3zrg-a1-m1-cB 65 65 1.0000 1.0000 1.0000 7.20e-41 3zrg-a1-m1-cB_3zrg-a1-m1-cA
3 2xij-a1-m2-cA 710 22 0.1385 0.0127 0.4091 2.4 2xij-a1-m1-cA_2xij-a1-m2-cA
4 2xij-a1-m1-cA 710 22 0.1385 0.0127 0.4091 2.4 2xij-a1-m1-cA_2xij-a1-m2-cA
5 8dgf-a1-m1-cD 1534 75 0.2615 0.0111 0.2267 4.1 8dgf-a1-m1-cD_8dgf-a1-m1-cC
6 8dgf-a1-m1-cC 1540 75 0.2615 0.0110 0.2267 4.1 8dgf-a1-m1-cD_8dgf-a1-m1-cC
7 4i3l-a1-m1-cA 367 42 0.2308 0.0409 0.3571 5.1 4i3l-a1-m1-cB_4i3l-a1-m1-cA
8 4i3l-a1-m1-cB 358 42 0.2308 0.0419 0.3571 7.5 4i3l-a1-m1-cB_4i3l-a1-m1-cA
9 4p3m-a1-m1-cB 389 31 0.1692 0.0283 0.3548 7.9 4p3m-a1-m1-cA_4p3m-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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