Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=18)
GPGPGPGPGPGPGPGPGP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3b0s-a2-m1-cF 18 18 1.0000 1.0000 1.0000 0.062 3b0s-a2-m1-cE_3b0s-a2-m1-cF
2 3b0s-a2-m1-cE 18 18 1.0000 1.0000 1.0000 0.062 3b0s-a2-m1-cD_3b0s-a2-m1-cE, 3b0s-a2-m1-cE_3b0s-a2-m1-cF
3 3b0s-a2-m1-cD 18 18 1.0000 1.0000 1.0000 0.062 3b0s-a2-m1-cD_3b0s-a2-m1-cE
4 3b2c-a3-m1-cI 20 18 1.0000 0.9000 1.0000 0.076 3b2c-a3-m1-cG_3b2c-a3-m1-cI
5 3b2c-a3-m1-cI 20 17 0.9444 0.8500 1.0000 0.21 3b2c-a3-m1-cG_3b2c-a3-m1-cI
6 3b2c-a3-m1-cI 20 17 0.9444 0.8500 1.0000 0.24 3b2c-a3-m1-cG_3b2c-a3-m1-cI
7 3b2c-a3-m1-cG 20 18 1.0000 0.9000 1.0000 0.076 3b2c-a3-m1-cG_3b2c-a3-m1-cI
8 3b2c-a3-m1-cG 20 17 0.9444 0.8500 1.0000 0.21 3b2c-a3-m1-cG_3b2c-a3-m1-cI
9 3b2c-a3-m1-cG 20 17 0.9444 0.8500 1.0000 0.24 3b2c-a3-m1-cG_3b2c-a3-m1-cI
10 3b2c-a2-m1-cE 20 18 1.0000 0.9000 1.0000 0.076 3b2c-a2-m1-cD_3b2c-a2-m1-cE
11 3b2c-a2-m1-cE 20 17 0.9444 0.8500 1.0000 0.21 3b2c-a2-m1-cD_3b2c-a2-m1-cE
12 3b2c-a2-m1-cE 20 17 0.9444 0.8500 1.0000 0.24 3b2c-a2-m1-cD_3b2c-a2-m1-cE
13 3b2c-a2-m1-cD 20 18 1.0000 0.9000 1.0000 0.076 3b2c-a2-m1-cD_3b2c-a2-m1-cE
14 3b2c-a2-m1-cD 20 17 0.9444 0.8500 1.0000 0.21 3b2c-a2-m1-cD_3b2c-a2-m1-cE
15 3b2c-a2-m1-cD 20 17 0.9444 0.8500 1.0000 0.24 3b2c-a2-m1-cD_3b2c-a2-m1-cE
16 1ei8-a3-m1-cF 20 18 1.0000 0.9000 1.0000 0.076 1ei8-a3-m1-cD_1ei8-a3-m1-cF
17 1ei8-a3-m1-cF 20 17 0.9444 0.8500 1.0000 0.21 1ei8-a3-m1-cD_1ei8-a3-m1-cF
18 1ei8-a3-m1-cF 20 17 0.9444 0.8500 1.0000 0.24 1ei8-a3-m1-cD_1ei8-a3-m1-cF
19 1ei8-a3-m1-cE 20 18 1.0000 0.9000 1.0000 0.076 1ei8-a3-m1-cB_1ei8-a3-m1-cE
20 1ei8-a3-m1-cE 20 17 0.9444 0.8500 1.0000 0.21 1ei8-a3-m1-cB_1ei8-a3-m1-cE
21 1ei8-a3-m1-cE 20 17 0.9444 0.8500 1.0000 0.24 1ei8-a3-m1-cB_1ei8-a3-m1-cE
22 1ei8-a3-m1-cD 20 18 1.0000 0.9000 1.0000 0.076 1ei8-a3-m1-cD_1ei8-a3-m1-cF
23 1ei8-a3-m1-cD 20 17 0.9444 0.8500 1.0000 0.21 1ei8-a3-m1-cD_1ei8-a3-m1-cF
24 1ei8-a3-m1-cD 20 17 0.9444 0.8500 1.0000 0.24 1ei8-a3-m1-cD_1ei8-a3-m1-cF
25 1ei8-a3-m1-cB 20 18 1.0000 0.9000 1.0000 0.076 1ei8-a3-m1-cA_1ei8-a3-m1-cB, 1ei8-a3-m1-cB_1ei8-a3-m1-cE
26 1ei8-a3-m1-cB 20 17 0.9444 0.8500 1.0000 0.21 1ei8-a3-m1-cA_1ei8-a3-m1-cB, 1ei8-a3-m1-cB_1ei8-a3-m1-cE
27 1ei8-a3-m1-cB 20 17 0.9444 0.8500 1.0000 0.24 1ei8-a3-m1-cA_1ei8-a3-m1-cB, 1ei8-a3-m1-cB_1ei8-a3-m1-cE
28 1ei8-a3-m1-cA 20 18 1.0000 0.9000 1.0000 0.076 1ei8-a3-m1-cA_1ei8-a3-m1-cB
29 1ei8-a3-m1-cA 20 17 0.9444 0.8500 1.0000 0.21 1ei8-a3-m1-cA_1ei8-a3-m1-cB
30 1ei8-a3-m1-cA 20 17 0.9444 0.8500 1.0000 0.24 1ei8-a3-m1-cA_1ei8-a3-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600