Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=26)
GPGPGPGPQGIAGQRGVVGLGPGPGP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2mqs-a1-m1-cD 26 26 1.0000 1.0000 1.0000 9.00e-09 2mqs-a1-m1-cD_2mqs-a1-m1-cB, 2mqs-a1-m1-cD_2mqs-a1-m1-cC
2 2mqs-a1-m1-cC 28 26 1.0000 0.9286 1.0000 1.29e-08 2mqs-a1-m1-cD_2mqs-a1-m1-cC
3 2mqs-a1-m1-cB 28 26 1.0000 0.9286 1.0000 1.29e-08 2mqs-a1-m1-cD_2mqs-a1-m1-cB
4 3hr2-a1-m9-cC 939 16 0.6154 0.0170 1.0000 0.006 3hr2-a1-m9-cA_3hr2-a1-m9-cC
5 3hr2-a1-m9-cA 939 16 0.6154 0.0170 1.0000 0.006 3hr2-a1-m9-cA_3hr2-a1-m9-cC
6 3hqv-a1-m9-cA 939 16 0.6154 0.0170 1.0000 0.006 3hqv-a1-m8-cC_3hqv-a1-m9-cA
7 3hqv-a1-m8-cC 939 16 0.6154 0.0170 1.0000 0.006 3hqv-a1-m8-cC_3hqv-a1-m9-cA
8 3hqv-a1-m3-cA 939 16 0.6154 0.0170 1.0000 0.006 3hqv-a1-m1-cA_3hqv-a1-m3-cA
9 3hqv-a1-m1-cA 939 16 0.6154 0.0170 1.0000 0.006 3hqv-a1-m1-cA_3hqv-a1-m3-cA
10 6los-a1-m2-cG 21 24 0.6538 0.8095 0.7083 0.10 6los-a1-m2-cH_6los-a1-m2-cG
11 4auo-a1-m1-cC 32 26 0.6923 0.5625 0.6923 0.43 4auo-a1-m1-cE_4auo-a1-m1-cC
12 4auo-a2-m1-cG 30 24 0.6538 0.5667 0.7083 0.99 4auo-a2-m1-cF_4auo-a2-m1-cG, 4auo-a2-m1-cH_4auo-a2-m1-cG
13 4auo-a2-m1-cF 30 24 0.6538 0.5667 0.7083 0.99 4auo-a2-m1-cF_4auo-a2-m1-cG, 4auo-a2-m1-cH_4auo-a2-m1-cF
14 4auo-a1-m1-cD 30 24 0.6538 0.5667 0.7083 0.99 4auo-a1-m1-cE_4auo-a1-m1-cD
15 6los-a1-m2-cH 19 22 0.5769 0.7895 0.6818 1.0 6los-a1-m2-cH_6los-a1-m2-cG
16 4auo-a2-m1-cH 28 16 0.5000 0.4643 0.8125 1.2 4auo-a2-m1-cH_4auo-a2-m1-cF, 4auo-a2-m1-cH_4auo-a2-m1-cG
17 4auo-a1-m1-cE 28 16 0.5000 0.4643 0.8125 1.2 4auo-a1-m1-cE_4auo-a1-m1-cC, 4auo-a1-m1-cE_4auo-a1-m1-cD
18 7wws-a1-m1-cC 21 14 0.3462 0.4286 0.6429 6.6 7wws-a1-m1-cA_7wws-a1-m1-cC, 7wws-a1-m1-cB_7wws-a1-m1-cC
19 7wws-a1-m1-cB 21 14 0.3462 0.4286 0.6429 6.6 7wws-a1-m1-cA_7wws-a1-m1-cB, 7wws-a1-m1-cB_7wws-a1-m1-cC
20 7wws-a1-m1-cA 21 14 0.3462 0.4286 0.6429 6.6 7wws-a1-m1-cA_7wws-a1-m1-cB, 7wws-a1-m1-cA_7wws-a1-m1-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600