Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=20)
GPGPGPGPRGQGVGFGPGPG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2wuh-a1-m1-cC 20 20 1.0000 1.0000 1.0000 4.76e-05 2wuh-a1-m1-cD_2wuh-a1-m1-cC
2 2wuh-a1-m1-cB 20 20 1.0000 1.0000 1.0000 4.76e-05 2wuh-a1-m1-cD_2wuh-a1-m1-cB
3 2wuh-a1-m1-cD 19 19 0.9500 1.0000 1.0000 1.19e-04 2wuh-a1-m1-cD_2wuh-a1-m1-cB, 2wuh-a1-m1-cD_2wuh-a1-m1-cC
4 4dmt-a1-m1-cC 22 21 1.0000 0.9091 0.9524 0.003 4dmt-a1-m1-cA_4dmt-a1-m1-cC, 4dmt-a1-m1-cB_4dmt-a1-m1-cC
5 4dmt-a1-m1-cB 22 21 1.0000 0.9091 0.9524 0.003 4dmt-a1-m1-cA_4dmt-a1-m1-cB, 4dmt-a1-m1-cB_4dmt-a1-m1-cC
6 4dmt-a1-m1-cA 22 21 1.0000 0.9091 0.9524 0.003 4dmt-a1-m1-cA_4dmt-a1-m1-cB, 4dmt-a1-m1-cA_4dmt-a1-m1-cC
7 4gyx-a1-m1-cB 22 19 0.9000 0.8182 0.9474 0.022 4gyx-a1-m1-cA_4gyx-a1-m1-cB
8 4gyx-a1-m1-cA 22 19 0.9000 0.8182 0.9474 0.022 4gyx-a1-m1-cA_4gyx-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600