Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=22)
GPGPGPGPRGQGVMGFGPGPGP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4dmt-a1-m1-cC 22 22 1.0000 1.0000 1.0000 1.69e-06 4dmt-a1-m1-cA_4dmt-a1-m1-cC, 4dmt-a1-m1-cB_4dmt-a1-m1-cC
2 4dmt-a1-m1-cB 22 22 1.0000 1.0000 1.0000 1.69e-06 4dmt-a1-m1-cA_4dmt-a1-m1-cB, 4dmt-a1-m1-cB_4dmt-a1-m1-cC
3 4dmt-a1-m1-cA 22 22 1.0000 1.0000 1.0000 1.69e-06 4dmt-a1-m1-cA_4dmt-a1-m1-cB, 4dmt-a1-m1-cA_4dmt-a1-m1-cC
4 2v53-a1-m1-cD 26 19 0.8182 0.6923 0.9474 0.011 2v53-a1-m1-cB_2v53-a1-m1-cD, 2v53-a1-m1-cC_2v53-a1-m1-cD
5 2v53-a1-m1-cC 26 19 0.8182 0.6923 0.9474 0.011 2v53-a1-m1-cC_2v53-a1-m1-cD
6 2v53-a1-m1-cB 26 19 0.8182 0.6923 0.9474 0.011 2v53-a1-m1-cB_2v53-a1-m1-cD
7 5h64-a1-m1-ca 2101 12 0.3636 0.0038 0.6667 1.1 5h64-a1-m1-cA_5h64-a1-m1-ca
8 5h64-a1-m1-cA 2101 12 0.3636 0.0038 0.6667 1.1 5h64-a1-m1-cA_5h64-a1-m1-ca
9 6los-a1-m2-cG 21 21 0.6818 0.7143 0.7143 1.8 6los-a1-m2-cH_6los-a1-m2-cG
10 4gyx-a1-m1-cB 22 10 0.4545 0.4545 1.0000 6.2 4gyx-a1-m1-cA_4gyx-a1-m1-cB
11 4gyx-a1-m1-cA 22 10 0.4545 0.4545 1.0000 6.2 4gyx-a1-m1-cA_4gyx-a1-m1-cB
12 1q7s-a3-m1-cB 114 15 0.3636 0.0702 0.5333 8.4 1q7s-a3-m1-cB_1q7s-a3-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600